Index Catalog // ScholarsArchive@OSU

Localized Structures in a Diffusive Run-and-Tumble Model of Myxococcus xanthus

Creator:: Flynn, Patrick Thomas
Abstract:: The bacteria Myxococcus xanthus clusters into fruiting bodies in the absence of food. The movement of M. xanthus has three aspects: self-propulsion (run), change of direction due to collision (tumble), and Brownian fluctuations in movement. We propose a minimalist PDE model for the concentrations of left and right moving agents...
Resource Type:: Honors College Thesis
Full Text:: dampening due to diffusion. Key Words: mathematical biology, differential equations, dynamical systems

Framework for Computational Modelling of Cellular Diffusion Systems

Creator:: Senger, Mitchell John
Abstract:: Many biological processes are regulated by the presence and movement of cellular Ca²⁺ ions. The concentration of Ca²⁺ in a cellular environment is regulated by IP₃ sensitive channels that lie on the surface of a cell’s endoplasmic reticulum. Little is known about the macroscopic effects of intracellular Ca²⁺ activity, so...
Resource Type:: Undergraduate Thesis
Full Text:: Framework for Computational Modeling of Cellular

The Development of Computational Methods for Studying Plant-Pathogen Interactions

Creator:: Pankow, Rebecca C.
Abstract:: Modern technology has enabled the advancement of biological research through the use of powerful machines and computers as well as innovative computer programs. Advances in sequencing technology and software enable us to make de novo assemblies of organism genomes, and the development of specialized computer programs can automate routine but...
Resource Type:: Honors College Thesis
Full Text:: of Computer Science presented on July 15, 2011. Title: The Development of Computational Methods for

The Mathematics of Critical Shifts in Ecological Networks with Alternative Stable State Theory, A Potential Framework for Early Warning Indicators

Creator:: Kupperman, Michael D.
Abstract:: A long running problem in mathematical biology is the prediction of extinction events, a specialized case of the larger global stability problem found in differential equations and dynamical systems theory. A central technical question is how to introduce the randomness observed in real ecological systems not accounted for in deterministic...
Resource Type:: Honors College Thesis
Full Text:: of Science in Biochemistry & Molecular Biology (Honors Scholar) Presented June 14, 2019

A Literature Review About Computational Modeling of Breast Cancer Cell Signaling for In Silico Therapeutics

Creator:: Bihari, Tanya
Resource Type:: Presentation
Full Text:: Literature Review About Computational Modeling of Breast Cancer Cell Signaling for In Silico Therapeutics

Computational study of the electrostatic interaction between kinesin-5/BimC and the microtubule

Creator:: Chen, Zishi
Resource Type:: Undergraduate Thesis
Full Text:: Thesis Draft 5.21_WQ.docx Computational Study of the Electrostatic

Computational Fluid Dynamics (CFD) Simulation of Microfluidic Focusing in a Low-Cost Flow Cytometer

Creator:: Parrott, Connor
Abstract:: Inertial microfluidics refers to the manipulation of the location and velocity of particles suspended in microscale fluid flow without the introduction of outside forces. It has promising applications in flow cytometry and other biomedical technologies because of the potential for lowering cost and complexity relative to current particle focusing methods....
Resource Type:: Honors College Thesis
Full Text:: Computational Fluid Dynamics (CFD) Simulation of

Sonification as a pathway to knowledge

Creator:: Fitch, Russell Alan
Abstract:: This paper explores the use of sonification, the conversion of data into sound, to convey the significance of SARS-COV-2 and its global impact. It emphasizes sonification as a valuable tool for making complex data accessible, particularly in high school education. Sonification, an interdisciplinary field, leverages the human auditory system's pattern...
Resource Type:: Honors College Thesis
Full Text:: degree of Honors Baccalaureate of Science in Biochemistry and Molecular Biology (Honors Scholar

Sequencing the Mitochondrial Genome of the Common Milkweed: Asclepias syriaca

Creator:: Edwards, Christopher A.
Abstract:: Few plant mitochondrial genomes have been published to date because of their structural complexity and difficulties in their physical isolation. Plant mitochondrial genomes are known to have a high level of heteroplasmy and can exist as several different circular or linear strands. Sequencing additional mitochondrial genomes will help to understand...
Resource Type:: Honors College Thesis
Full Text::  degree of Honors Baccalaureate of Science in  Biology presented on June 5th, 2013. Title: Sequencing the

The Crystal Structure of the Potential Drug Target Mycoplasma pneumoniae Glycerol 3-Phosphate Oxidase

Creator:: Palioca, Callia K.
Abstract:: Mycoplasma pneumoniae is the primary cause of community-acquired pneumonias, including what is commonly known as walking pneumonia. This disease affects people from all demographics, but especially children and older adults. Outbreaks are a significant public health concern and work to develop new pharmacological agents is currently being researched. How M....
Resource Type:: Honors College Thesis
Full Text:: Callia K. Palioca for the degree of Honors Baccalaureate of Science in Biology presented on May 31 st

ScholarsArchive@OSU

Localized Structures in a Diffusive Run-and-Tumble Model of Myxococcus xanthus

Framework for Computational Modelling of Cellular Diffusion Systems

The Development of Computational Methods for Studying Plant-Pathogen Interactions

The Mathematics of Critical Shifts in Ecological Networks with Alternative Stable State Theory, A Potential Framework for Early Warning Indicators

A Literature Review About Computational Modeling of Breast Cancer Cell Signaling for In Silico Therapeutics

Computational study of the electrostatic interaction between kinesin-5/BimC and the microtubule

Computational Fluid Dynamics (CFD) Simulation of Microfluidic Focusing in a Low-Cost Flow Cytometer

Sonification as a pathway to knowledge

Sequencing the Mitochondrial Genome of the Common Milkweed: Asclepias syriaca

The Crystal Structure of the Potential Drug Target Mycoplasma pneumoniae Glycerol 3-Phosphate Oxidase

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