A small eddy viscosity or mass diffusivity that varies with height has been found to have unexpected effects on the Kelvin-Helmholtz (KH) instability of a stably stratified shear layer near the neutral stability boundary. In particular, varying viscosity can increase the growth rate of the instability in contrast to the...
Directional wave spectra have been estimated in this study based
upon simultaneous subsurface measurements of current and pressure.
Two previously developed methods, the stochastic and deterministic
approaches, have been reviewed and restudied. It is demonstrated by
means of the Correlation Theorem that the stochastic and deterministic
approaches are, under certain...
Pectic substances in the cell wall have long thought to
be responsible for the textural changes in fruit during
ripening and senescence. Compositional variation within
the pectic macromolecules could affect the external
characteristics of the fruit. Strawberries undergo adverse
quality changes such as softening and juice loss after
freezing and...
Cubic phase Li₇La₃Zr₂O₁₂ (LLZO) is a promising solid electrolyte for all solid-state lithium-ion battery, due to its reasonable ionic conductivity, stable against metallic Li, wide chemical window, and thermal and chemical stability. The main aim of this thesis is to investigate the influences of different synthesis methods on the structure...
Modulation assistance is widely employed to improve chip management in turning. This process is also known as modulated turning. Modulated turning transforms continuous cutting into intermittent cutting by periodically disengaging the tool tip from the workpiece, resulting in the generation of short, easily managed chips. This novel method improves the...
In this thesis, we introduce a novel Explanation Neural Network (XNN) to explain the predictions made by a deep network. The XNN works by embedding a high-dimensional activation vector of a deep network layer non-linearly into a low-dimensional explanation space while retaining faithfulness i.e., the original deep learning predictions can...
Labeling videos is costly, time-consuming and tedious. These costs can escalate in applications such as medical diagnosis or autonomous driving where we need domain expertise for annotation. Few-shot action recognition aims to solve this problem by annotation-efficient learning mechanisms.
This thesis presents MetaUVFS as the first Unsupervised Meta-learning algorithm for...
This thesis consists of two major components. The first part is concerned with video object instance segmentation (VOS), which is the task of assigning per-pixel labels perframe of a video sequence to indicate foreground object instance membership, given the first frame ground truth mask. VOS has myriad applications, from video...
The abilities of plant biologists to characterize the genetic basis of physiological traits are limited by their abilities to obtain quantitative data representing precise details of trait variation and mainly to collect this data on a high-throughput scale at low cost. Deep learning-based methods have demonstrated unprecedented potential to automate...
Particleboard is widely used for making bookshelf, furniture, cabinets and many other interior products. At present, particleboard is mainly produced with wood particles and urea-formaldehyde (UF) resins. The emission of carcinogenic formaldehyde in the production and use of particleboard has generated an urgent need for development of a formaldehyde-free wood...
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Kaichang Li
Particleboard is widely used for making bookshelf, furniture, cabinets and many
Heatmap regression has became one of the mainstream approaches to localize facial landmarks. As Convolutional Neural Network (CNN) and Recurrent Neural Network (RNN) are becoming popular in solving computer vision tasks, extensive research has been done on these architectures. However, the loss function for heatmap regression is rarely studied. In...
Reverse osmosis (RO) is being increasingly used in treatment of domestic
wastewater secondary effluent for potable and non-potable reuse. Among other
foulants, dissolved biopolymers, i.e., proteins and polysaccharides, can lead to
severe fouling of RO membranes. In this study, the roles of RO membrane surface
properties in membrane fouling by...
The fact that African Americans are under represented in the natural
resource professions is well known and commonly acknowledged. Terms such
as conspicuously absent, manifest imbalance and zero representation have all
been used to describe the current status of African American natural resource
professionals. The data suggests that in the...
Global warming is an increasingly serious problem around the world. To mitigate the influence of global warming on people’s lives, the Obama Administration put an emphasis on reducing greenhouse gas (GHG) emissions to mitigate global warming. The adoption of energy efficient vehicles, including hybrid electric vehicles (HEVs), plug-in hybrid vehicles...
Food allergies are an important health problem and affect up to 2% of the adult population and 8% of children worldwide. Under the Food Allergen Labeling and Consumer Protection Act (FALCPA) of 2004, foods that contain or derive from the "Big 8" allergens (milk, egg, finfish, crustacean shellfish, tree nuts,...
Development of graphical user interface (GUI) applications is difficult since the process can be both complicated and tedious. We propose a solution directed at reducing programming time and effort required to build a GUI application. Our solution is based on the Petri Network, the Oregon SpeedCode Universe (OSU) Application Framework,...
This thesis uses an anthropological approach to examine the current social status
of the young elderly in contemporary urban China and explores the problems these people
are facing. A review of literature sets up complementary theoretical frameworks for the
understanding of the interaction between changing social environment and transitional life...
Object categorization is one of the fundamental topics in computer vision research. Most current work in object categorization aims to discriminate among generic object classes with gross differences. However, many applications require much finer distinctions. This thesis focuses on the design, evaluation and analysis of learning algorithms for fine- grained...
Resource Planning and Management (RPM) network is a graphical
representation of input-output relationships among activities and
resources within a system. Both resources (events) and activities
(decisions) are explicitly represented as nodes in all RPM networks.
Depending upon the relationships being depicted, RPM networks can
be classified into Relational (R), Precedence...
The management options chosen by decision makers in
managing wildlife and fisheries have different effects for
diverse user groups. As a result, natural resource management
agencies often seek information to evaluate the effects of
alternative policies on the benefits provided to different
constituencies. Over the past decade, economists have
developed...
Transparent conductive oxides (TCOs), primarily indium doped tin oxide, have been widely used in numerous fields since decades ago, such as solar cells, displays, OLEDs and ‘smart windows’ etc. Owing to the scarcity of indium, there is a great demand for new alternative materials. Metal/insulator/metal (MIM) diodes are a critical...
In this research, the possibility of the precessional magnetization switching by focused surface acoustic waves, without external magnetic field, has been demonstrated. The technique of generating an effective magnetic field by applying stress to a magnetostrictive material via a surface acoustic wave is applied to perform field-free magnetization switching. It...
This investigation deals with the chaotic rocking response and overturning
stability of offshore equipment subjected to base excitations due to wave-induced
motions of the supporting compliant offshore structural system. The equipment
compliant structural system is modelled as a free-standing rigid object subjected
to horizontal and vertical base accelerations. Three of...
Damping-off of table beets is of widespread occurrence in the
Willamette Valley of Oregon. Pythium ultimum Trow., Pythium
debaryanum Hess., and Rhizoctonia solani Kuhn. were found to be the
important pathogenic fungi causing the disease.
Trichoderma viride, Penicillium spp. Streptomyces spp. and
certain isolates of bacteria, all saprophytic organisms associated...
The fouling characteristics of a desalted crude oil were investigated in a systematic
investigation. There are two main parts in this study, the dry bulk tests (dehydrated crude
oil) and the wet bulk tests (to which desalter brine was added). Three barrels of desalted
crude oil provided by Amoco Oil...
The prevalence of herbal supplement use by the elderly and factors that influence regular versus occasional use were investigated in a group of independent residents of a continuing care retirement community in Salem, Oregon. A nine-page questionnaire was delivered to 402 residents of Capital Manor; 318 questionnaires were usable (84%...
National Geographic’s June 2018 magazine titled “Planet or Plastic?” drew attention to a growing problem throughout the world: ocean plastic. The eight plastic-related articles in the magazine are an example of science communication as a critical method of not only disseminating information but also raising awareness of the marine debris...
An innovative silver nano-dimple arrays (Ag DAs)-integrated microfluidic device was developed to achieve highly sensitive fluorescence-based nucleic acid detection. The Ag DAs were utilized to produce surface plasmon resonance (SPR) for strong fluorescence enhancement. We systematically investigated the plasmon-enhanced fluorescence by controlling the nanostructure dimension of the Ag DA substrate....
The decline of many Pacific salmon stocks has stimulated interest in the early life history and habitat requirements of juvenile salmon. Although estuarine habitat associations of juvenile salmon have been investigated in many coastal areas of the eastern Pacific Ocean, until recently, little was known about juvenile salmonid ecology within...
This study examined the distribution and behavior of adult spring chinook salmon
(Oncorhynchus tshawytscha) related to patterns of stream temperature and physical
habitat at channel unit, reach, and basin-wide spatial scales in both a wilderness stream
and a disturbed stream in the John Day River basin in northeastern Oregon. Thermal...
The integration of photodetectors with IC circuits provides a significant
improvement over conventional designs. Featuring noise reduction, extended frequency
responses, lower power consumption, and data operations, these integrated devices open
challenging opportunities for many applications. One type of photodetector has the
potential for important applications in the life science and...
The high level of parallelism in throughput processors such as GPGPUs has resulted in significantly changed on-chip data traffic behaviors. This demands new research to identify and address the limiting factors of networks-on-chip (NoCs) in the context of throughput processors. In this work, we first quantitatively analyze the performance of...
Bulk metallic glasses (BMGs) are relatively new amorphous materials that have received much attention in recent years. Rapid cooling methods from the liquid state provides the possibility to bypass crystallization during solidification. Due to the lack of crystal defects such as grain boundaries and dislocations, BMGs can have some special...
Culture, thought worldview and language have been
discussed for a long time in different fields from various
perspectives. However, the basis of this study is the view
of language as both the product and producer of people just
as people are the producer and product of language. Each
language requires...
A VLSI system for image compression based on two dimensional discrete cosine transform
(2-D DCT) is designed and its performance is estimated. The focus is mainly on the reduction
of power consumption and a reasonable speed. A 2-D DCT algorithm called row-column
decomposition is chosen for the VLSI design of...
A characterization of the antigenic determinants (epitopes) of the glycoprotein (G) of infectious hematopoietic necrosis virus (IHNV) was made with different regions of the G gene expressed in Escherichia coli. A cDNA copy of the G gene was divided into four fragments after Taq I digestion and these fragments were...
A partial cystatin cDNA from rainbow trout was
generated by reverse transcription polymerase chain reaction
with two degenerate primers. The partial cystatin PCR
product was 168 bp and used to screen trout liver λgt 11
cDNA library. Four positive clones were isolated and
designated as cstl, cst2, cst3 and cst4....
The current state of research on gossip techniques for wireless broadcasting is very limited because past research efforts have mostly focused on using gossip techniques for multicast communication. On the other hand, those research efforts that have focused on using gossip techniques for wireless broadcast communications ignore energy efficiency and...
1,1,1-Tricholorethane (1,1,1-TCA), a widely used industrial solvents, is one of the most common subsurface contaminants. Transformation processes in the subsurface can result in the production of 1,1-dichioroethane (1,1-DCA) and 1,1- dichioroethene (l,1-DCE) from 1,1,1-TCA contamination, resulting in plumes of mixed chlorinated aliphatic hydrocarbons (CAHs). A butane-utilizing microorganism, strain 1 83BP,...
The radiation effects in III-V heterojunction devices are investigated in this thesis. Two types of heterojunction devices studied are InGaP/GaAs single heterojunction bipolar transistors (SHBTs) and GaN-based heterojunction light emitting diodes (LEDs). InGaP/GaAS HBTs are investigated for high energy (67 and 105 MeV) proton irradiation effects while GaN heterojunction LEDs...
Recent studies of headwater streams have demonstrated their importance to overall watershed biodiversity, nutrient cycling, and energy flux. However, little attention has been paid to long-term effects of forest harvest on macroinvertebrate communities in headwater streams. This study investigated headwater stream macroinvertebrate communities in the H.J. Andrews Experimental Forest, Oregon,...
This research was designed to broaden the understanding of how timber-harvest affects aquatic macroinvertebrates in perennial and intermittent headwater streams. This study compared emergent and benthic macroinvertebrate assemblages from 20 headwater streams in the central Oregon Coast Range that varied by harvest condition and flow duration. Through comparison of the...
Pacific lampreys (Lampetra tridentata) have declined in abundance in the Columbia River Basin. Although, the reasons for the decline are unclear, we suggest that development of hydroelectric dams and habitat alterations in tributaries as the main causes. The available knowledge of life history of Pacific lampreys and status from dam...
This thesis is about visual relationship detection. This is an important task in computer vision. The goal is to detect all visual relationships in a given image between objects. This thesis presents a new approach to this problem. Our approach does not use an object detector as a common pre-processing...
Currently, a popular approach to image classification uses the deep Transformer architecture. In a Transformer, the attention mechanism enables the model to learn efficiently with fewer computational resources than the convolutional neural networks (CNNs). In this thesis, we study the sparse attention mechanism widely used in the Transformers developed specifically...
In 2008, China released a new green initiative, the Green Securities Policy, to increase the sustainability of Chinese capital markets. One of the integral components of the policy is the new environmental disclosure regulation which prescribes Chinese listed companies in the 14 highly polluting industries to report required environmental information....
The machine learning and deep learning models have been very lightly explored in analyzing the behavior of On-Chip network traffic. These models have proven their potential in pattern recognition, classification etc... In this paper we analyze the spatial pattern that each workload exhibits in its life cycle during execution. We...
Although deep reinforcement learning agents have produced impressive results in many domains, their decision making is difficult to explain to humans. To address this problem, past work has mainly focused on explaining why an action was chosen in a given state. A different type of explanation that is useful is...
Albacore tuna (Thunnus alalunga) rolls were developed using two albacore meat levels and three different treatment combinations. Albacore meat levels of 82 and 88% (Alb82 and Alb88) of the total weight formulation were examined. The different treatments consisted of 0.3% sodium tripolyphosphate (STPP), 0.3% STPP plus nitrites (150 ppm), and...
The ability to create reproducible cryptographically secure keys from temporal environments (e.g., images) has the potential to be a contributor to effective cryptographic mechanisms. Due to the noisy nature of these environments, achieving this goal in a user friendly fashion is a very challenging task, especially since there exists a...
Silicon integrated circuit (IC) technology has enabled numerous electrical and optical sensors used in biological and chemical assays, where they can increase performance while decreasing cost and size compared to traditional detectors. There is significant potential to further leverage IC technology for lab-on-chip applications, creating affordable and portable medical diagnostic...
Shan-Mei, a Tsou aboriginal village in Taiwan, is widely known as a legend of environmental conservation, where ecotourism has been successfully combined with integrated community development. Indigenous knowledge containing "ecological wisdom" and decision-making based on consensus are perceived to be the greatest contributors to this achievement. I conducted three months...
Copper zinc tin sulfide (CZTS) is a potential solar material for thin film solar cells according to its suitable band gap in the visible light range, high absorption coefficient, low toxicity, good photostability and relative earth abundance of component elements. However, the production cost of this solar thin film material...
This thesis addresses the problem of temporal action segmentation in videos, where the goal is to label every video frame with the appropriate action class present. We focus on the domain of NFL football videos, where action classes represent common football play types. For action segmentation, we use a temporal...
The species compositions and densities of the littoral and pelagic zooplankton
assemblages in Crater Lake were compared. The littoral and pelagic zooplankton
assemblages of most lakes are typically different due to different habitat conditions in the
two zones. The littoral zone of Crater Lake lacks many of the habitat characteristics,...
There is a strong interest in the robotics community in learning how humans grasp and manipulate objects, partly because robots need to operate in human environments and partly because humans are currently much better in physical interaction tasks than robots. This thesis seeks to identify the human heuristics for grasping...
Microfluidic devices have enabled lab-on-a-chip (LOC) systems that allow for complex sample analysis and preparation in a compact form factor. One technology that may benefit from a microfluidic approach and further miniaturization is flow cytometry. Flow cytometry is an analysis technique for enumerating and characterizing populations of cells; this is...
We consider the problem of computing the cannonical polyadic decomposition (CPD) for large-scale dense tensors. This work is a combination of alternating least squares and fiber sampling. Data sparsity can be leveraged to handle large tensor CPD, but this route is not feasible for dense data. Inspired by stochastic optimization's...
Sports analytics is rapidly evolving today through the use of computer vision systems that automatically extract huge amount of information inherently present in multimedia data without much human assistance. This information can facilitate a better understanding of patterns and strategies in various sports. However, for non-professional teams, due to expense...
In the past half century, industrial robots have developed a strong presence in manufacturing. They now commonly perform tasks such as materials handling, assembly, welding, and painting. Unfortunately robotic machining tasks have seen limited deployments. The majority of machining robots are designed for soft materials like wood or plastic and...
In this report, two studies are presented that utilize computations to predict and elucidate the reaction mechanisms of two different copper catalyzed reactions. Each study provides insight into the various chemical transformations, as well as the how and why behind regioselectivity and isotopic selectivity. The importance of this research is...
Graphical user interface (GUI) applications based on object-oriented design are difficult to build without a supportive tool to graphically visualize the structure of the entire application. As an application becomes larger and more complex, it becomes harder to visualize its class hierarchy. Several systems, such as Smalltalk, MacApp, THINK C...
The need to detect trace amounts of target molecules is great, particularly when it comes to biosensing. With the early detection of a disease, the odds of the successful treatment of an individual increases significantly. To enhance the capability of biomolecular detection, we have created an optical biosensor capable of...
Transmit beamforming is an important technique employed to improve efficiency and signal quality in wireless communication systems by steering signals towards their in- tended users. It often arises jointly with the antenna selection problem due to various reasons, such as limited number of radio frequency (RF) chains and energy/resource effi-...
MicroRNAs are a highly conserved class of small endogenous RNA, about ~22nt in length, involved in post-transcriptional gene silencing and have prominent roles in disease and development. Though the process of microRNA discovery was once an arduous task, the advent of high throughput sequencing technology has resulted in novel microRNAs...
Diabetes is a pandemic that affects nearly 29.1 million Americans and the fourth leading cause of mortality in the US. Type 1 diabetes is a chronic condition which occurs due to little to no production of insulin by the pancreas. This form of diabetes requires constant monitoring of blood glucose...
Many species of the Fagaceae have been variously interpreted
on the basis, primarily of external morphological characteristics.
The objectives of this study are to elucidate generic and specific
characteristics of the wood of Fagaceae and to attempt to obtain evidence
regarding taxonomic relationships among some of the species
occurring in...
Pollination is an essential ecosystem service that sustains functioning ecosystems and aids in food production. In response to recent, widespread declines of managed and native bee populations, many land managers have shown interest in developing conservation and restoration plans for enhancing native bee habitat. However, there is a lack of...
The numerical modeling of motions in the atmosphere's
planetary boundary layer (PBL) is a challenging task. In
general, the boundary layer interacts with both the overlying
atmosphere and the underlying land or water surface
in a complex manner. Random turbulence is also present in
the PBL which precludes exact prediction...
The continuous development of higher performing battery materials has emerged in parallel with the development of new manufacturing processes. Nanomaterials are one solution to addressing the cycling and performance challenges that limit existing battery cells. However, many of the methods used today for nanomaterial synthesis are high temperature batch methods...
Cellulose nanocrystals (CNCs) have received considerable attention over the last ten years because CNCs can be produced from renewable materials such as straw, wood, cotton, and sea animals (tunicates). CNCs are slender rods with high aspect ratios (10-100) and the final dimensions of the CNCs depend on the starting material....
Montane meadows comprise less than 5% of the landscape of the western Cascades of Oregon, but they provide habitat for diverse species of plants and pollinators. Little is known about plant-pollinator network structure at these sites. This study quantified plant-pollinator interactions over the summer of 2011, based on six observations...
L1R, a myristylated late gene product of vaccinia virus, is essential for formation of infectious intracellular mature virions (IMV). In its absence, only viral particles arrested at an immature stage are detected and no infectious progeny virus are produced. Previous studies have shown that the L1R protein is exclusively associated...
Lactose intolerance is a common food intolerance that occurs because of a post-weaning deficiency of lactase, an enzyme that cleaves the glyosidic bond of lactose. About 75% of the world's population is lactose intolerant. Common symptoms of lactose intolerance are abdominal pain, bloating and diarrhea. ~25% of the world’s population...
Silicon photonics has rapidly become one of the most promising photonic integration platforms. Especially, microring resonator (MRR) plays a pivotal role in silicon photonics and has been widely used for electro-optic (E-O) modulators and wavelength filters due to its small footprint, low energy consumption, and high quality factor (Q-factor). Recently,...
The propagation characteristics of a new coupled fin line structure, with
asymetrical, rectangular, top and bottom housings, is evaluated by using the modal
analysis technique. The boundary Green's function of the structure, relating the surface
currents to the electric fields is derived by using this technique. The propagation
characteristics, i.e....
This paper describes a Lesson Generating System for CAI, which, by relieving the course author from the burden of programming, provides an efficient means for developing courseware to augment classroom instruction.
This thesis proposes a novel technique for the design of pipelined and cyclic ADCs utilizing generalized radix gain stages. Several models have been proposed for the optimization of high performance pipelined ADCs by various researchers. This work builds upon them, using a simple but accurate model to estimate the optimal...
Many studies addressing the toxicity of silver nanomaterials have found that smaller sized silver nanoparticles are usually more toxic to organisms and in cell culture than particles of larger sizes yet it is not entirely clear why. We investigated the size dependent toxicity of silver nanoparticles by measuring the response...
The low risk and sustainable implementation of nanotechnology requires understanding how nanomaterial physicochemical properties influence their toxicity. Major drivers of toxicity need to be avoided while maximizing product efficacy so nanomaterials can be produced to best serve their applications and be of low risk when intentionally or unintentionally released into...
Improved recovery of cryopreserved meristems and calli from in
vitro currant (Ribes aureum Pursh and R. ciliatum Humb. & Bonpl.) plants
was obtained by two-hour pretreatment with sucrose, proline, abscisic
acid-responsive protein (RABP), and bovine serum albumin (BSA)
solutions. Meristems and calli cold-acclimatized for one week were
immersed in pretreatment...
Thin-film transistors (TFTs) are primarily used as a switching element in liquid crystal
displays. Currently, amorphous silicon is the dominant TFT technology for displays, but
higher performance TFTs will become necessary to enable ultra-definition resolution
high-frequency large-area displays. Amorphous zinc tin oxide (ZTO) TFTs were
fabricated by RF magnetron sputter...
A fully integrated CMOS GPS receiver RF front end optimized for low power operation is presented. The system operates with a supply voltage down to 250 mV. A prototype has been fabricated in a 0.13μm CMOS process and includes a low voltage LNA, quadrature oscillators, and quadrature mixers. It exhibits...
We explored an optofluidic sensing mechanism from inkjet-printed droplets on diatom biosilica using surface-enhanced Raman scattering (SERS). Our study revealed a new biosensing strategy that combines the microscopic fluidic flow induced by the droplet evaporation and the photonic crystal effects of diatom frustules, which can provide an ultra-sensitive, cost-effective biosensing...
The ability of salmon plasma protein (SPP) obtained from Chinook salmon at the Klaskanine Fish Hatchery (Astoria, OR) to inhibit protease enzymes found in Pacific whiting (PW) surimi and salmon mince as well as the effect of SPP on the gelation properties of PW surimi under various heating conditions was...
This thesis describes the development of a flash analog-to-digital converter based on
current-mode technique. The advantages of current -mode technique are higher speed,
smaller chip area, and simple division of reference current based on current mirror. A
current-mode comparator is designed consisting of a cascode current mirror and a
current...
In this thesis, a method is presented to construct minimum-time
robot trajectories for predefined Cartesian end-effector path in a
workspace containing obstacles. The method is preferably applied to a
geometric collision-free path of a SCARA robot by using the theories of
Bezier, B-spline, and parabolic blending curves. The motion of...