The rates of biological introductions and invasions are increasing, driving up the associated harms to ecosystems and economies. The spread and effects of invasive organisms depend on the specifics of the introduction, the character of the invaded ecosystem, and multiple traits of the invasive organism itself. One mechanism by which...
Fission product yields (FPYs) are used for a wide range of applications including nuclear fission theory, nuclear reactor design, reactor antineutrino anomaly, stellar nucleosynthesis, and nuclear forensics. These applications rely on FPYs that were last evaluated in 1993, which included measurements from all over the world up until 1993. In...
The first part of this manuscript is about the total synthesis of the aspidosperma alkaloids leuconoxine, melodinine E and mersicarpine. Our synthetic strategy used a radical translocation-conjugate addition cascade to construct the core of the natural product. Specifically, a vinyl radical was generated from the homolysis of the C–I bond...
Interactions between proteins are essential to life, driving and regulating a majority of processes within all living cells. Study of protein-protein interactions reveals that some proteins act as hubs within networks of interactions, binding to many partner proteins. These hubs therefore are of particular importance to understanding protein function, interwoven...
Small-scale fisheries account for at least 40 percent of global fisheries catch, 90 percent of the people employed along capture fisheries value chains operate in small-scale fisheries, and 45 million women participate in small-scale fisheries globally. The past few years have brought warnings from policymakers and resource managers about risks...
Personal health monitoring tools, a subset of point-of care-diagnostics, enable more frequent testing of chronic health conditions outside of a clinic setting and can inform personalized therapy or support telehealth diagnostic capabilities. While there is evidence that regular monitoring of chronic conditions can lead to better health outcomes and lower...
This dissertation presents novel, field-activated smart material systems for the actuation and control of autonomous robots. Smart materials, a type of material whose properties can be changed with an external stimuli, represent a promising direction to expand upon existing robotic control and actuation methods, particularly in the sub-fields of soft...
The self-help literature is full of texts on both self-compassion and postpartum depression. However, there has been minimal scientific exploration of the literature on these topics. As such, mental health researchers and practitioners have little sense of the psycholinguistic discourse contained in this literature. This study aimed to fill this...
Cell signaling is often mediated by protein-protein interactions, which must be specific, tunable, and transient to allow agile responsiveness to cellular messages. Due to their unique properties, multivalent, intrinsically disordered proteins make ideal candidates to accomplish these vital tasks. A single protein with multiple binding sites may bind numerous partners,...
Iterative algorithms are simple yet efficient in solving large-scale optimization problems in practice. With a surge in the amount of data in past decades, these methods have become increasingly important in many application areas including matrix/tensor recovery, deep learning, data mining, and reinforcement learning. To optimize or improve iterative algorithms,...
Riparian zones are ecotones between terrestrial and aquatic ecosystems. Processes in streams are strongly influenced by riparian forest communities, age, stage and structure. Temperate forests across much of North America, including riparian areas, are recovering from historic land clearing with many stands in the stem-exclusion phase of development in which...
Robotic Bipedal locomotion holds the potential for efficient, robust traversal of difficult terrain. The difficulty lies in the dynamics of locomotion which complicate control and motion planning. Bipedal locomotion dynamics are dimensionally large problems, extremely nonlinear, and operate on the limits of actuator capabilities, which limit the performance of generic...
The bimolecular reaction of two carbenoid species resulting in the formation of a carbon-carbon double bond (pi-system), referred to herein as carbenoid eliminative cross-coupling (CEXC), involves a series of three fundamental steps: (i) ate-complex formation (transmetalation), (ii) 1,2-metalate rearrangement, and (iii) beta-elimination. All three steps are stereospecific and so the...
Metallic glasses (MGs), also called amorphous metals, are metals or metallic alloys trapped in a disordered glassy state. Their amorphous nature and absence of features such as crystal lattices and defects (dislocations, grain boundaries etc.) endows them with a host of properties that far surpass those of common crystalline materials....
Aroma is one of the major components that determines the quality of wine and consumer acceptability. Fruitiness is a highly desirable aroma quality in white wines and has been well accepted by consumers across the globe. Tropical fruit aroma has been substantially studied in Sauvignon Blanc wines due to its...
Many home users nowadays use various smart devices to improve the efficiency and convenience of their home environments. Trigger-action platforms such as “If-This-Then-That” (IFTTT) enable end users to connect different smart devices and services using simple apps to control these devices and automate the tasks (e.g., if the camera detects...
Per- and polyfluoroalkyl substances (PFAS) are a broad class of anthropogenic chemicals characterized by highly stable carbon-fluorine (C-F) bonds. PFAS are widely used in industrial and consumer products for their surface-active and stain-resistant properties and are ubiquitously detected in environmental media, biota, and human biomatrices. Although some PFAS are known...
Smoldering combustion in wildland fires is a critical phenomenon that needs in-depth study because it can initiate with weaker ignition sources, can persist for long periods, is difficult to suppress, and can transit to flaming combustion. Cellulose, hemicellulose, and lignin are the major organic constituents within biomass, in varying proportions...
Grapevine red blotch virus (GRBV) is a single-stranded DNA virus that causes grapevine red blotch disease (GRBD). Symptoms of GRBD include red discoloring of leaf margins and red veins on the underside of the leaves. GRBD affects the plant's metabolism and photosynthetic pathways, and disrupts carbon translocation and chlorophyll concentrations....
Climate model simulations and paleoclimate proxies are two tools that enable an understanding of the climate history of the Earth. When utilized together, they form a powerful paradigm for understanding past changes. Proxies are the only physical link to the past conditions on Earth, and models “fill in the gaps”...
Mosses (Phylum Bryophyta) are widely considered to be among the most ancient groups of land plants (embryophytes) and they are the second most speciose embryophyte phylum with ~13,000 extant species. Despite their diversity and antiquity, mosses have a limited fossil record, which primarily consists of gametophytes entombed in Cenozoic amber....
The purpose of this study was to explore the lived experiences of school-based agriculture education (SBAE) teachers who self-identified as blended pedagogues. This study specifically focused on SBAE teachers' beliefs and how those beliefs influence their blended teaching classroom practice. Teacher beliefs are personal, subjective, and temporally and contextually stable....
Background: According to the National Mental Health Survey (NMHS), the treatment gap of any mental disorder in India among the general population was reported to be as high as 83% (R. S. Murthy, 2017). There is insufficient evidence currently describing the treatment gap among the child and adolescent population. Given...
Uncertainties in general circulation model (GCM) representations of marine boundary layer (MBL) shallow cloud cover contribute substantially to the spread in model predictions of future climate. Further uncertainties in GCM output arise from an incomplete understanding of cloud-aerosol interactions. For example, the Fifth Assessment Report from the Intergovernmental Panel on...
Breast cancer is the leading cancer in women with an estimated 13% of women in the United States developing a form of invasive breast cancer in her lifetime. The survival rate is estimated to be 85%, but the American Cancer Society estimates that early detection of breast cancer in the...
To examine the macrophage response to M. avium, I compared inflammasome and cytosolic sensor expression and activation. My result demonstrated that virulent strains of M. avium (A5 and 104) suppress IL-1β production and induce IFN-β production in macrophages. M. avium mutants deficient at DNA export in the biofilm exhibited reduced...
Wildfire impacts have intensified in many ecosystems across the western United States due to the combined impact of fire exclusion, climate change, and land management practices. However, on many of these landscapes, fire is a fundamental ecological process that has shaped vegetation structural and compositional diversity, ecosystem function, landscape pattern,...
Mental health disorders are the leading cause of disability worldwide. The strong need for mental health services has prompted intensive global efforts to develop, evaluate, and deliver effective mental health treatment, especially for low- and middle-income countries. The counseling profession in the United States has responded to this global need...
In light of water scarcity and the impacts of climate change, there is an increased need to understand the interaction between land use characteristics and ecohydrologic processes in semiarid regions. Additionally, many semiarid and arid regions face various land management challenges, including woody plant encroachment, decreased snowpack, and increased stream...
Electrodeposition is a versatile polymer deposition technique to create nano-microscale materials using an electrical field generated from a charged droplet of solution and a grounded collector. Electrospinning or electrospraying can occur during electrodeposition, leading to the creation of nanofibers or bead-like materials depending on the process parameters. Photopolymerization of the...
The Common Core State Standards for Mathematical Practice (SMPs) describe ways of thinking and doing mathematics that parallels how mathematicians engage with mathematics (National Governors Association for Best Practices, 2010). These standards reflect a broader goal in K-12 mathematics education focused on moving beyond K-12 learners acquiring knowledge of mathematical...
Engineering education research has led to a greater understanding of the gap in preparedness of students for the engineering industry. Multiple studies comparing the workplace and academic contexts and the participants in those contexts (i.e., students, faculty, and engineering practitioners) have emphasized similarities and differences between the two contexts by...
In this dissertation I explore the Arms representation and activities for teaching quantum mechanics invented at Oregon State University. In the Arms representation students embody quantum states. The Arms activities are presented as an exemplar of the unique physics classroom culture of the upper-division Paradigms in Physics program. In the...
Alzheimer’s Disease (AD) is a neurodegenerative pathology currently affecting nearly 44 million individuals worldwide, yet there are not currently any effective treatments or preventions for AD despite the rapid development in our understanding of the disease over the last four decades. The medical and sanitary innovations of the last century...
Hop (Humulus lupulus L. var. lupulus) is a diploid, dioecious plant with an extensive history of cultivation and use in brewing, as a textile, and for its therapeutic properties. Hop is prized for its ability to produce a variety of aromatic and flavor compounds, as well as compounds with anti-microbial...
Forest collaboration emerged in Oregon about 30 years ago as a way to address increasing conflict and distrust amongst stakeholder groups and public land managers. The concept has spread widely, and forest collaboratives are now commonplace on most National Forests in the Pacific Northwest. These groups include a wide range...
Ultrafast spectroscopy has recently gained momentum as a powerful, noninvasive characterization toolset capable of studying a diverse array of samples with applications in chemistry, physics, biology, engineering, and more. Two popular ultrafast spectroscopic techniques include femtosecond transient absorption (fs-TA) and femtosecond stimulated Raman spectroscopy (FSRS). The latter of these techniques...
Issues of injustice in society (e.g. racism, classism, sexism, ableism) are perpetuated in and through educational opportunities, including mathematics learning (Freire, 1970/2000). Those that are committed to disrupting the interlocking systems that create disparities and oppression in mathematics education are considered to be “pursuing justice.” Pursuit of justice can involve...
Programming is integrated across the workflow of multiple domains where end-user programmers, those who need to program as a means to an end, regularly need to code. In the modern setting of collaborative development, end-user programmers have to interpret the intentions behind existing code to contribute and build solutions to...
Managers of forest and plantation ecosystems are encountering growing problems involving plant pathogens and the expanding geographic ranges of these pathogens. Historically unexposed stands are exceptionally vulnerable when a non-native pathogen is introduced because these pathogens can cause devastating disease in a host population that lacks co-evolved resistance mechanisms. One...
Laser Powder Bed Fusion (LPBF) is a process commonly used to create additively manufactured metal parts. The flexibility and complexity allowed by the LPBF process provides opportunity for significant advancement in multiple industries as parts can be customized in shape and function for specific needs. These benefits can be compounded...
Luteinizing hormone (LH) stimulates the secretion of gonadal steroid hormones (testosterone in males and estrogen/progesterone in females) and is under negative feedback from gonadal hormones. In gonad-intact dogs, LH is secreted in low amplitude pulses of concentrations under 1 ng/mL; except for the day of the LH surge in females...
Unmet healthcare needs and/or delays in needed care are widespread among patients with serious mental illness (SMI). Mental healthcare delivery has changed dramatically over the last two decades. Although access to mental health specialists remains challenging, mental healthcare is now increasingly provided in primary care settings. However, it is unclear...
With continuing improvements in performance and capability, GPU processing has gained significant and growing interest across science and industry. With this interest, research has increasingly focused upon methods of processing algorithms with stochastic, non-uniform branching while maintaining low divergence. Central among these methods is thread-data remapping (TDR), whereby data is...
Papers proposing novel machine learning algorithms tend to present the algorithm or technique in question in the best possible light. The standard practice is generally for authors to emphasize their proposed algorithms' performance in the precise setting where it is maximally impressive, often by only fully evaluating their best known...
The general theme of this dissertation is the development of new analytical sensors to quantitatively study biological and environmental samples in aqueous and non-aqueous environments. A platinum ultramicroelectrode (UME) and a unique carbon-based pH microprobe were used to design a new SECM-based electrochemical bioassay. The Pt UME was used to...
Machine Translation, the task of automatically translating between human languages has been studied for decades. This task is used to be solved by count-based statistical models, e.g. Phrase-based Statistical Machine Translation (PBSMT), which solves the translation problem by separately training a statistical language model and a translation model. Recently, Neural...
Despite climate change requiring the cutback of fossil fuel consumption, the world continues to increase its energy demands each year. To meet the ambitious goals outlined during the Paris Agreement in 2015, which set a goal to limit global warming to 1.5°C [1], changes in energy production methods are necessary....
Submerged aquatic vegetation (SAV) species, such as seagrasses, are highly valued in estuaries because of the many economic, ecological, and cultural services that they provide, including shelter for fisheries, minimizing water turbidity, and improving am-bient water quality. SAV can also alter its physical environment by attenuating wave and current velocities,...