Index Catalog // ScholarsArchive@OSU

Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

Creator:: Parks, Matthew, Cronn, Richard, and Liston, Aaron
Abstract:: Background: Through next-generation sequencing, the amount of sequence data potentially available for phylogenetic analyses has increased exponentially in recent years. Simultaneously, the risk of incorporating ‘noisy’ data with misleading phylogenetic signal has also increased, and may disproportionately influence the topology of weakly supported nodes and lineages featuring rapid radiations and/or...
Resource Type:: Article
Full Text:: Pinus L. (Pinaceae) Matthew Parks1*, Richard Cronn2 and Aaron Liston1 Abstract Background: Through next

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

Creator:: Njuguna, Wambui, Liston, Aaron, Cronn, Richard, Ashman, Tia-Lynn, and Bassil, Nahla
Abstract:: The cultivated strawberry is one of the youngest domesticated plants, developed in France in the 1700s from chance hybridization between two western hemisphere octoploid species. However, little is known about the evolution of the species that gave rise to this important fruit crop. Phylogenetic analysis of chloroplast genome sequences of...
Resource Type:: Article
Full Text:: Cronn c, Tia-Lynn Ashman d, Nahla Bassil e aDepartment of Horticulture, Oregon State University, ALS

Richard A. Ballinger papers, 1907-1920, in the University of Washington Libraries

Creator:: University of Washington. Libraries, Berner, Richard C., Johnson, Ruth, Inglis, Kari, and United States. National Historical Publications Commission
Abstract:: Gerald W. Williams Collection
Resource Type:: Book

Hyb-Seq: Combining target enrichment and genome skimming for plant phylogenomics

Creator:: Weitemier, Kevin, Straub, Shannon C. K., Cronn, Richard C., Fishbein, Mark, Schmickl, Roswitha, McDonnell, Angela, and Liston, Aaron
Abstract:: PREMISE OF THE STUDY: Hyb-Seq, the combination of target enrichment and genome skimming allows simultaneous data collection for low-copy nuclear genes and high-copy genomic targets for plant systematics and evolution studies. METHODS AND RESULTS: Genome and transcriptome assemblies for milkweed (Asclepias syriaca) were utilized to design enrichment probes for 3385...
Resource Type:: Article
Full Text:: skimming for plant phylogenomics 1 Kevin Weitemier2,7, Shannon C.K. Straub2,7, Richard C. Cronn3, Mark

Low Diversity in theMitogenome of Sperm Whales Revealed by Next-Generation Sequencing

Creator:: Alexander, Alana, Steel, Debbie, Slikas, Beth, Hoekzema, Kendra, Carraher, Colm, Parks, Matthew, Cronn, Richard, and Baker, C. Scott
Abstract:: Large population sizes and global distributions generally associate with high mitochondrial DNA control region (CR) diversity. The sperm whale (Physeter macrocephalus) is an exception, showing low CR diversity relative to other cetaceans; however, diversity levels throughout the remainder of the sperm whale mitogenome are unknown. We sequenced 20 mitogenomes from...
Resource Type:: Article
Full Text:: , Kendra Hoekzema2, Colm Carraher3,4, Matthew Parks5, Richard Cronn6, and C. Scott Baker1,2,3 1Marine

Effects of cultural practices on the yield and vitamin C content of broccoli

Creator:: Anderson, Wendy (Wendy Lee), 1951-
Resource Type:: Masters Thesis
Full Text:: Practices on the Yield and Vitamin C Content of Broccoli Abstract approved: ^ ^ H^rry^ Mack

A study of ascorbic acid metabolism of adolescent children

Creator:: Storvick, Clara A. (Clara Amanda), 1906-
Abstract:: Published December 1947. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
Resource Type:: Technical Report
Full Text:: . They believed the plasma ascorbic acid level was a more accurate index of vitamin C nutrition when the

Influence of ascorbic acid supplementation on copper status in young adult men

Creator:: Finley, Elizabeth Bidwell
Abstract:: Thirteen healthy adult males, ages 20-40, consuming self selected diets, were given instructions to take one 500 mg tablet of ascorbic acid three times a day with their meals for a period of ten weeks. The effect of this daily supplementation on copper status was investigated. An estimation made from...
Resource Type:: Masters Thesis
Full Text:: rats had low cytochrome c levels that increased more quickly when given purified rat ceruloplasmin

The effect of erythorbic acid on the determination of ascorbic acid levels in selected foods by high performance liquid chromatography and spectrophotometry

Creator:: Tuan, Shenhsiu
Abstract:: A high performance liquid chromatography (HPLC) procedure using a LiChrosorb-NH₂ column and a eluant buffer of 75:25 (v/v) of acetonitrile:0.05 M KH₂P0₄, pH 5.95, was developed for the successful separation and determination of ascorbic and erythorbic acids in selected food samples. Application of the method, which is sensitive, rapid and...
Resource Type:: Masters Thesis
Full Text:: , natural and artificial flavor drink mixes, and Hi-C drinks gave satisfactory results. Dehydroascorbic

ListonAaronBotanyDataSupplementS1.pdf

Creator:: Cronn, Richard, Knaus, Brian J., Liston, Aaron, Maughan, Peter J., Parks, Matthew, Syring, John V., and Udall, Joshua
Abstract:: • Premise of the study: The dramatic advances offered by modern DNA sequencers continue to redefine the limits of what can be accomplished in comparative plant biology. Even with recent achievements, however, plant genomes present obstacles that can make it difficult to execute large-scale population and phylogenetic studies on next-generation...
Full Text:: 99(2): 383-396. 2012. – Data supplement S1 – Page 1 Cronn, Richard, Brian J. Knaus, Aaron Liston

ScholarsArchive@OSU

Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

Insights into phylogeny, sex function and age of Fragaria based on whole chloroplast genome sequencing

Richard A. Ballinger papers, 1907-1920, in the University of Washington Libraries

Hyb-Seq: Combining target enrichment and genome skimming for plant phylogenomics

Low Diversity in theMitogenome of Sperm Whales Revealed by Next-Generation Sequencing

Effects of cultural practices on the yield and vitamin C content of broccoli

A study of ascorbic acid metabolism of adolescent children

Influence of ascorbic acid supplementation on copper status in young adult men

The effect of erythorbic acid on the determination of ascorbic acid levels in selected foods by high performance liquid chromatography and spectrophotometry

ListonAaronBotanyDataSupplementS1.pdf

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