Background: Pre-genomic and post-genomic studies demonstrate that chlamydiae actively recombine in vitro and
in vivo, although the molecular and cellular biology of this process is not well understood. In this study, we
determined the genome sequence of twelve Chlamydia trachomatis recombinants that were generated in vitro
under antibiotic selection. These...
Capillary pressure-saturation data obtained for unconsolidated porous media with different liquids are examined to investigate the effects of clay-liquid interactions on liquid retention. Liquid retention functions are assumed to reflect the effective pore-size distributions. The hydraulic variables, capillary pressure and saturation, are transformed to account for changes in liquid retention...
The goal of this project was to estimate the total annual cost of salmon recovery efforts throughout the Columbia River Basin from all stakeholders, including direct and indirect costs. How much is spent on salmon recovery efforts each year in the Columbia River Basin? Depending on who you ask, you...
This report summarizes the results of crab studies undertaken during the fall of 1957 and 1958 in the Columbia River estuary. The purpose of this project was to determine the shell condition of the crabs available in this area during the period when crab fishing is prohibited in the ocean,...
Policy development and decision-making play a critical role in natural resource management in the Pacific Northwest. To realise my internship requirements for the Professional Science Masters in Fisheries and Wildlife Administration, I completed internships with: the Oregon Department of Fish and Wildlife (ODFW), Portland State University – National Policy Process...
In 2011 Oregon enacted a public education open enrollment policy that gives students and families the choice of what school to attend, regardless of district lines. Despite the lack of public information, this policy will sunset this school year unless it is further extended during legislative session. This paper attempts...
The inverse electron demand Diels Alder reaction between tetrazines and strained alkenes is an exceptionally useful tool in functionalizing to biomolecules since it is orthogonal to the chemistry of most living systems and have exceptionally high rate constants. In particular reactions between strained trans-cyclooctenes (sTCO) and tetrazines can achieve second...
ROSS (Robotic Oceanographic Surface Sampler) is an autonomous boat, equipped with oceanographic sensors, used for studying the ocean’s surface. One of its advantages over traditional research vessels is its ability to sample near glaciers, an area too dangerous for manned ships. In order to properly ascertain deep ocean heat’s effect...
Climate and terrestrial vegetation have had mutual feedbacks for nearly five hundred million years, yet both are now departing from recent historical norms, with uncertain implications for forest ecosystems. This dissertation outlines the current and potential future climate responses of lichen and bryophyte communities in the United States as part...
Climate and terrestrial vegetation have had mutual feedbacks for nearly five hundred million years, yet both are now departing from recent historical norms, with uncertain implications for forest ecosystems. This dissertation outlines the current and potential future climate responses of lichen and bryophyte communities in the United States as part...
Full Text:
RobertJ. Smith for the degree of Doctor of Philosophy in Botany and Plant Pathology
presented on May 1
Climate and terrestrial vegetation have had mutual feedbacks for nearly five hundred million years, yet both are now departing from recent historical norms, with uncertain implications for forest ecosystems. This dissertation outlines the current and potential future climate responses of lichen and bryophyte communities in the United States as part...
Empirical studies and theory have identified many early predictors of children's academic achievement and externalizing problems. Moreover, research shows that children's early cognitive abilities and behavioral problems are strong predictors of later academic achievement and externalizing problems. The current dissertation studies extend previous work and unpack how early predictors relate...
Sediments are the major compartment in aquatic environments for many materials of toxic or nutrient concern. The lack of knowledge of the phase associations of toxic metals in sediments is the largest deficiency in our understanding of the environmental hazard posed by metal contamination. This study examined the sedimentary partitioning...
Today’s marketing researchers provide incredible depth of information which explains much consumption behavior in the marketplace. Research into consumer behavior, especially the family of research related to consumer culture theory, provides theory on which cultural phenomena motivate consumers to exhibit the patterns they do in the marketplace. This study uses...
In 2008, the Department of Energy (DOE) and Nuclear Regulatory Commission (NCR) decided that the Next Generation Nuclear Plant (NGNP) would be the Very High Temperature Reactor (VHTR). In support of the licensing and validation effort of the VHTR, Oregon State University was tasked with designing, building, and operating a...
Andesitic and rhyolitic magmatism was active during the mid-
Tertiary (Early Miocene) of the Ash Peak area, southeastern Arizona.
Andesitic magmas of similar composition both preceded and followed the
low- and high-silica rhyolitic magmas. The changes from andesitic to
rhyolitic and back to andesitic volcanism is postulated to be the...
Few aquatic products of the United States have limited competition from imported supplies. This situation existed with the
domestic supply of freshwater crawfish until 1994. The 52 thousand MT round weight domestic production from aquaculture and
capture fisheries experienced major import competition at that point. Imports of value added crawfish...
Executive functions (including attentional shifting/flexibility, working memory, and inhibitory control) are strong predictors of children's early school success (Blair & Razza, 2007; Espy et al., 2004). The current study explored questions related to measurement of executive functions in preschool-aged children. Convergent and predictive validity were assessed for two traditional executive...
This thesis describes investigations of archaeological materials recovered from Site ORBE2, an early-twentieth century historic site in Corvallis, OR. The archaeological materials were found only after construction workers had excavated trenches underneath the still-standing structure on the site in order to install a new foundation. Over 1500 artifacts were recovered...
Interactions between paralytic shellfish poison (PSP) and
components of the butter clam (Saxidomus giganteus) were studied to
determine which component was involved in the binding and retention
of PSP by the butter clam, and to characterize the nature and
strength of the interaction. A simple and accurate assay for PSP...
Multinational corporations must be aware of the business and financial reporting issues that await them abroad. Investors also must have this knowledge in order to adequately interpret the financial information they receive from these companies. This study compares and contrasts the business environments in the US and Mexico, with a...
The identification of sources of point and nonpoint fecal pollution is difficult to determine. Understanding the sources of fecal organisms in quality limited waters could greatly enhance our ability to restore and protect the water quality and habitat of these systems. Antibiotic resistance patterns of fecal streptococci bacteria were analyzed...
To assess the consequences of increased recreational activity on bald eagles (Haliaeetus leucocephalus), we studied factors that influenced their behavior and reproductive success in the Gulkana River basin, Alaska, from 1989 to 1993. Both extrinsic and intrinsic factors were associated with reproductive success. Productivity averaged 0.86 young fledged per occupied...
The relationships among total water potential (psi), osmotic potential ([pi]), pressure potential (P), and relative water content (R*) were determined during four consecutive soil drying cycles for shoots of Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) seedlings. In each cycle, seedlings were sampled for pressure-volume determinations as soil water was depleted gradually...
The dynamics of stands In old-growth ponderosa pine (Pinus
ponderosa) forests on the eastern flank of the central Oregon
Cascades are Investigated. Age structure and spatial pattern of
ponderosa pine within the Pringle Falls Experimental Forest
Research Natural Area coupled with the fire history of the area
aid In Interpreting...
Multinational corporations must be aware of the business and financial reporting issues
that await them abroad. Investors also must have this knowledge in order to adequately
interpret the financial information they receive from these companies. This study
compares and contrasts the business environments in the US and Mexico, with a...
Radial colony growth of three isolates of Gliocladium roseum and three isolates of Bottytis cinerea were measured on 1/4 strength potato dextrose agar amended with concentrations of NaHCO₃ ranging from 0-2% (w/v). Compared to the control, reductions in colony diameter of the B. cinerea isolates ranged from 60-79% and 73-89%...
A succession of basaltic lavas, volcaniclastic sediments, and lignite beds in the Holmatindur region of eastern Iceland provides the means for tying magnetic reversal stratigraphy and a record of major North Atlantic cooling to a precise radiometric timescale. A prominent part of the section is the Holmatindur classic bed, which...
Eighty-one microbial species isolated from seafoods and other marine sources were examined to determine the extent of interactions among these species. Spot-plates, cross-plates, and concurrent growth experiments at 7, 15, 20, and 30 C indicated that Lactobacillus species were capable of inhibiting other microorganisms. Lactobacillus species isolated from oysters and...
The bluffs and plateaus of the eastern Columbia River are floristically rich and ecologically intricate. A previous descriptive study of the unique scabland vegetation on the Gov. Tom McCall Preserve at Rowena Plateau in Oregon included delineation of several distinct or intergrading native and non-native vegetation units. In this study...
A new class of nearshore waves based on the shear instability of a steady longshore current is discussed. The dynamics depend on the conservation of potential vorticity but with the background vorticity field, traditionally the role of Coriolis in larger scale flows, supplied by the shear structure of the longshore...
The files are zipped and will need to be unzipped prior to viewing. Images are contained within 8 sub-folders: Crystal Creek Riparian Sep 2010, Crystal Creek Uplands Sep 2010, Lamar River Riparian Sep 2010, Lamar River Uplands Sep 2010, Rose Creek Riparian Sep 2010, Rose Creek Uplands Set 2010, Slough...
The 1995/96 reintroduction of gray wolves (Canis lupus) into Yellowstone National Park
after a 70 year absence has allowed for studies of tri-trophic cascades involving wolves, elk
(Cervus elaphus), and plant species such as aspen (Populus tremuloides), cottonwoods (Populus
spp.), and willows (Salix spp.). To investigate the status of this...
Full Text:
Trophic cascades in Yellowstone: The first 15 years after wolf reintroduction
William J. Ripple ⇑, Robert
Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate
vegetation shifts due to climate change, air pollution or changes in vascular plant community structure. Techniques for
estimating lichen biomass have traditionally required destructive harvesting that is painstaking and impractical, so we...
Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate
vegetation shifts due to climate change, air pollution or changes in vascular plant community structure. Techniques for
estimating lichen biomass have traditionally required destructive harvesting that is painstaking and impractical, so we...
Full Text:
Abbey Rosso1, Peter Neitlich1*, RobertJ. Smith2
1 National Park Service, Winthrop, Washington, United
Plagiobothrys hirtus is Oregon’s top priority for endangered plant species recovery, and the wetlands of Douglas County provide the only habitat for this plant in the world. The goal is to downlist this species from endangered to threatened, and in order to do that, existing populations must be protected, and...
Full Text:
Plagiobothrys hirtus (Boraginaceae), the rough popcornflower
Courtney Wilson, Kelly Amsberry, and Dr. RobertJ
Plagiobothrys hirtus is Oregon’s top priority for endangered plant species recovery, and the wetlands of Douglas County provide the only habitat for this plant in the world. The goal is to downlist this species from endangered to threatened, and in order to do that, existing populations must be protected, and...
Full Text:
, and Dr. RobertJ. Meinke, Oregon Department of Agriculture, Oregon State University
Literature Cited
Mortality due to infectious diseases is seldom reported in the Greater Sage-Grouse (Centrocercus urophasianus). A case of necrotic enteritis associated with Clostridium perfringens type A is described in a free-ranging adult male sage-grouse in eastern Oregon. Clostridial enteritis is known to cause outbreaks of mortality in various domestic and wild...
Annual recruitment of the New Zealand longfin eel (Anguilla dieffenbachii) has decreased by around 75 percent since heavy levels of commercial fishing began in the early 1970s. Given the unsustainability of existing regulatory policy, a deterministic multiple-cohort bioeconomic model is developed and applied to this system to gain insight into...
Data attacks on state estimation modify part of system
measurements such that the tempered measurements cause
incorrect system state estimates. Attack techniques proposed
in the literature often require detailed knowledge of system
parameters. Such information is difficult to acquire in practice.
The subspace methods presented in this paper, on the...
Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate vegetation shifts due to climate change, air pollution or changes in vascular plant community structure. Techniques for estimating lichen biomass have traditionally required destructive harvesting that is painstaking and impractical, so we...
Idealized numerical simulations utilizing the Regional Ocean Modeling System (ROMS) are carried out to examine the response of buoyant river plume systems to offshore-directed wind stresses. It is found that after a few inertial periods of wind forcing the plume becomes detached from the coast and reaches a steady state...
We have investigated the depinning process of magnetic flux vortices in twinned crystals of YBa₂Cu₃O₇₋δ in intermediate applied magnetic fields parallel to the crystallographic c axis through precise resistivity measurements before and after fast-neutron irradiation. Of particular interest for each field is the power-law dependence of the electric field on...
Gray wolves (Canis lupus) were reintroduced into Yellowstone National Park in 1995-96, thus completing the park’s large predator guild. In the fall of 2010, approximately 15 years after wolf reintroduction, we sampled ten genera/species of berry-producing shrubs within 97 aspen (Populus tremuloides) stands in the park’s northern ungulate winter range....
The purpose of this report is to present some information which has been collected on the razor clam fisheries of Clatsop County beaches during the past several years. Topics which will be discussed are: (1) a brief resume' of the investigation, regulations, and catches prior to September 1954; (2) regulation...
Smallholder farmers rely on labor exchange to generate agricultural work when cash is rare and credit unavailable. Reciprocal altruism, biased by genetic kinship, has been implicated as the mechanism responsible for labor exchange; however, few empirical tests confirm this proposition. Competitive altruism could be operating if people differ in ability...
Plagiobothrys hirtus is Oregon’s top priority for endangered plant species recovery, and the wetlands of Douglas County provide the only habitat for this plant in the world. The goal is to downlist this species from endangered to threatened, and in order to do that, existing populations must be protected, and...
There is a lack of scientific consensus about how top-down and bottom-up forces interact to structure terrestrial ecosystems. This is especially true for systems with large carnivore and herbivore species where the effects of predation versus food limitation on herbivores are controversial. Uncertainty exists whether top-down forces driven by large...
The 1995/96 reintroduction of gray wolves (Canis lupus) into Yellowstone National Park after a 70 year absence has allowed for studies of tri-trophic cascades involving wolves, elk (Cervus elaphus), and plant species such as aspen (Populus tremuloides), cottonwoods (Populus spp.), and willows (Salix spp.). To investigate the status of this...
The kinetic mechanism of the unidirectional
H2-oxidizing hydrogenase from soybean nodule bacteroids has
been investigated with highly purified enzyme. Measurements
of the K, for H2 vary from 0.97 to 2.6 pM, and the K,,, for
methylene blue varies from 6 to 17 pM. With H2 and
methylene blue as substrates,...
Aldo Leopold, perhaps best known for his revolutionary and poignant essays about nature, was also an eloquent advocate during the 1930s and 1940s
of the need to maintain wolves and other large carnivores in forest and range ecosystems.He indicated that their loss set the stage for ungulate irruptions
and ecosystem...
We investigated how large carnivores, herbivores, and plants may be linked to the maintenance of native species biodiversity through trophic
cascades. The extirpation of wolves (Canis lupus) from Yellowstone National Park in the mid-1920s and their reintroduction in 1995 provided the
opportunity to examine the cascading effects of carnivore–herbivore interactions...
This report summarizes project progress in FY 1974. Activities were directed entirely at completing the fourth and final phase of work started in 1971, i.e., to survey groundfish resources on the continental shelf off Oregon between the Columbia River and Cape Blanco. Objectives of the survey were to obtain estimates...
We characterized the structure and composition of unmanaged riparian forests in three river basins in Oregon’s coastal mountains. Our objective was to evaluate stand attributes at three spatial scales: streamside (site), drainage network (stream order), and basin (subregion). Data on basal area, species composition, snag density, canopy cover, and tree...
Published March 1965. Facts and recommendations in this publication may no longer be valid. Please look for up-to-date information in the OSU Extension Catalog: http://extension.oregonstate.edu/catalog
An evaluation of the efficacy of steam treatment on reducing levels of Fusarium, Cylindrocarpon, and
Trichoderma within styroblock containers was conducted at the Plum Creek Nursery in Pablo, Montana. Although levels, of both Fusarium and Cylindrocarpon were significantly reduced by cleaning, relatively high populations of both these fungi persisted after...
Tumours arising from the dorsal surface of the tongue occurred in 3 horses from 14-23 years of age. Tumours were surgically excised at a referral hospital (1 case) and on the farm (2 cases) and submitted for histopathology. All tumours were multilobular and composed of vaguely nested, bland, oval to...
Tumours arising from the dorsal surface of the tongue occurred in 3 horses from 14-23 years of age. Tumours were surgically excised at a referral hospital (1 case) and on the farm (2 cases) and submitted for histopathology. All tumours were multilobular and composed of vaguely nested, bland, oval to...
Tumours arising from the dorsal surface of the tongue occurred in 3 horses from 14-23 years of age. Tumours were surgically excised at a referral hospital (1 case) and on the farm (2 cases) and submitted for histopathology. All tumours were multilobular and composed of vaguely nested, bland, oval to...
Tumours arising from the dorsal surface of the tongue occurred in 3 horses from 14-23 years of age. Tumours were surgically excised at a referral hospital (1 case) and on the farm (2 cases) and submitted for histopathology. All tumours were multilobular and composed of vaguely nested, bland, oval to...
Tumours arising from the dorsal surface of the tongue occurred in 3 horses from 14-23 years of age. Tumours were surgically excised at a referral hospital (1 case) and on the farm (2 cases) and submitted for histopathology. All tumours were multilobular and composed of vaguely nested, bland, oval to...
Full Text:
2
Beth A. Valentine
*
, RobertJ. Bildfell, Andrew J. Dunn
†
3
4
Department of Biomedical
Tumours arising from the dorsal surface of the tongue occurred in 3 horses from 14-23 years of age. Tumours were surgically excised at a referral hospital (1 case) and on the farm (2 cases) and submitted for histopathology. All tumours were multilobular and composed of vaguely nested, bland, oval to...
Rapid eruption of submarine lava flows during formation of the Caribbean plateau correlates closely with
ocean anoxic event 2 (OAE2), which bracketed the Cenomanian/Turonian boundary (~93.5 Ma). These events
also correspond with a positive excursion in carbon isotopic composition of seawater. Hydrothermal activity
associated with large-scale submarine volcanism may have...
Dataparallel C is a SIMD extension to the standard C programming language. It is derived from the original C* language developed by Thinking Machines Corporation.. We have nearly completed a third-generation Dataparallel C compiler, which transforms Dataparallel C programs into SPMD-style C code suitable for compilation and execution on NCUBE...
We describe our third generation C* compiler for a hypercube multicomputer. This production quality compiler features a full implementation of the language, including general pointer-based communication and support for separate compilation. The compiler incorporates new optimizations and utilizes an improved set of communication primitives. It supports a variety of standard...
Lavas of the Rano Rahi seamount field define a Nd-Pb-Sr isotopic array that connects, and substantially
overlaps, the arrays of the nearby East Pacific Rise axis and 5.6–28 Ma lavas of the Pukapuka ridge
system, situated between the seamount field and French Polynesia. Dating of Rano Rahi samples by
⁴⁰Ar-³⁹Ar...
A table containing data from random sampling plots in 87 randomly located aspen stands in northern Yellowstone, repeating measurements by Painter et al. (2014). Stands were relocated using GPS coordinates from 2012. Each stand contained one plot 2x30 m, extending from the live, dead or fallen tree nearest the GPS...
High‐resolution three‐dimensional (3‐D) seismic reflection data acquired on the R/V Thomas G. Thompson in 2000 reveal a pair of bottom simulating reflections (BSRs) across a broad region of southern Hydrate Ridge, offshore Oregon. The primary BSR (BSRp) is a regionally extensive reflection that lies 120–150 m below seafloor and exhibits...
The subtidal salt balance and the mechanisms driving the downgradient salt flux in the Hudson River estuary are investigated using measurements from a cross-channel mooring array of current meters, temperature and conductivity sensors, and cross-channel and along-estuary shipboard surveys obtained during the spring of 2002. Steady (subtidal) vertical shear dispersion,...
This paper presents a series of observing system simulation experiments (OSSEs) which are intended as a design study for a proposed array of instrumented moorings in the tropical Atlantic Ocean. Fields of TOPEX/Poseidon sea surface height anomalies are subsampled with the goal being reconstruction of the original fields through the...
A form of the linear, inviscid shallow water wave equation which includes alongshore uniform, but cross-shore variable, longshore currents and bathymetry is presented. This formulation provides a continuum between gravity waves (either leaky or edge waves) on a longshore current, and the recently discovered shear waves. In this paper we...
Current compression perpendicular-to-grain (C⊥) design values for wood members are based on mean stress obtained from ASTM D143 specimen. The standard ASTM test with metal on wood bearing has limited applicability in modern construction assemblies with C⊥ loading scenarios. Previous work has shown that end-bearing conditions and wood-on-wood C⊥ bearing...
Compression perpendicular to grain (C┴) of wood is an important property and has a drastic effect on serviceability of the structure. Typical C┴ loading scenarios include the bottom chord of a truss resting on the top plate of a shear wall and chords of a shear wall resting on the...
Laboratory-based testing does not allow for the sufficiently rapid return of data to enable optimal therapeutic monitoring of patients with metabolic diseases such as phenylketonuria (PKU). The typical turn-around time of several days for current laboratory-based testing is too slow to be practically useful for effective monitoring or optimizing therapy....
We present new age determinations, derived from ⁴⁰Ar–³⁹Ar incremental heating experiments, for basaltic lava flows from the Mandla lobe, located on the eastern margin of the main Deccan volcanic province, some ~ 1000 km from the Western Ghats escarpment. The most reliable estimates of crystallization ages come from 5 plateau...
Polyandry is a source of sexual conflict and males often try to limit female promiscuity. Consequently, male manipulation of receptivity via antiaphrodisiacs and copulatory plugs that prevent female remating can be a source of sexual conflict. This sexual conflict may be intensified when females must remate for fertility insurance. Male...
This summary of the 1958 inspection of the T. J. Starker Post Farm is issued as a supplement to the detailed Progress Report 11, October 1957. Complete Progress reports to be issued at intervals of 2-5 years will describe post series mentioned here and will summarize previous work.
The integration of satellite image data with forest inventory plot data is a popular approach for mapping forest vegetation over large regions. Several methodological choices regarding spatial scale, mostly related to spatial resolution or grain, can profoundly influence forest maps developed from plot and imagery data. Yet often the consequences...
Mountain pine beetle, Dendroctonus ponderosae Hopkins, is a primary agent of forest disturbance in western North America. Episodic outbreaks occur at the convergence
of favorable forest age and size class structure and climate patterns. Recent outbreaks have exceeded the historic range of variability of D. ponderosae-caused tree
mortality affecting ecosystem...
The federally threatened northern spotted owl (Strix occidentalis caurina) is the focus of intensive
conservation efforts that have led to much forested land being reserved as habitat for the owl and associated wildlife
species throughout the Pacific Northwest of the United States. Recently, however, a relatively new threat to spotted...
The atrypid brachiopod Strophatrypa skaflestadi gen. et sp. nov. occurs in unnamed upper Silurian strata exposed near the town of Hoonah on northeast Chichagof Island, Southeast Alaska. The new genus represents the first strophic atrypoid with many characters otherwise similar to those of the Atrypidae. Although this genus is known...