Potato Virus Y (PVY) is an enduring problem for potato production worldwide. Potato varieties that resist the “ordinary” strain PVYO were developed by breeders, but in recent years, recombinant strains of PVY have been able to circumvent this strain-specific resistance and evade growers and seed certification officials by causing fewer...
Parasites are ubiquitous members of ecological communities, capable of contributing to the decline of vulnerable populations. Therefore, monitoring parasite level is a critical component for host management. Molecular tools, such as quantitative polymerase chain reaction (qPCR), can be valuable additions to monitoring protocols that assess parasitic disease risk to hosts....
Black raspberry (Rubus occidentalis L.) is a US Pacific Northwest specialty crop prized for its unique flavor profile and nutritional attributes. A major obstacle for the raspberry industry is Black raspberry necrosis virus vectored by the large raspberry aphid (Amphorophora agathonica). Market expansion depends on production, which is currently hindered...
Isothiocyanates (ITCs) are produced by roots in a variety of agricultural plants, such as those within the Brassicaceae family. ITCs act as fumigants, and are used to control microbial plant pathogens by adding brassica-origin seed meal to soil prior to replanting. However, there is suggestion that the presence of residual...
Biotic and abiotic processes at continent-ocean interfaces cycle a disproportionate mass of carbon and nutrients relative to their global surface area, and microbial activity is a principal determinant of organic and inorganic matter flux in these transition zones. Most studies using modern high-throughput ‘omics techniques to link microorganisms with costal...
The mountain pine beetle has impacted over 5 million hectares of pine forests in the Rocky Mountains region in the United States. Although some beetle-killed stands are available for salvage harvesting, there are many uncertainties in harvesting beetle-killed stands including safety, costs, recoverable products and their values. These uncertainties impose...
Giant chinquapin (Chrysolepis chrysophylla) is an evergreen hardwood often found as a shrubby understory component of coniferous forests in the Pacific Northwest United States. Due to its ability to sprout quickly after disturbances such as fire and logging it is often viewed as a pest by forest managers. Like its...
The European hazelnut (Corylus avellana L.) is a tree nut crop that is important in Oregon, which produces 99% of the United States’ hazelnuts but only 5% of the world’s supply. In order to maintain this market share, farmers in Oregon need cultivars that produce high quality nuts, mature early,...
Coral reefs form vast ecosystems in tropical oceans that are hotspots for biodiversity and are economically valuable. The ecological success of coral reefs is made possible by the symbiotic relationship between corals and dinoflagellate algae from the family Symbiodiniaceae. In this symbiosis, the algae are found within host gastrodermal cells...
Otoferlin is a C2-domain, transmembrane protein whose mutated form is responsible for the DFNB9 subtype of prelingual hearing impairment. Mutations in otoferlin cause an autosomal recessive, non-syndromic form of deafness that is characterized by auditory neuropathy/ auditory dissynchrony (AN/AD), meaning that the outer hair cells (OHCs) are normal, and the...
On coral reefs, disturbances rarely occur in isolation. Global stressors such as increasing seawater temperature often coincide with local stressors like nutrient pollution. In the face of increasing anthropogenic stress, corals can function as environmental sentinels, although little is known about how multiple stressors interact to disrupt their associated bacterial...
Septoria canker remains the most important disease of poplars in intensively managed forest plantations. Genetic resistance has long been considered the best way to manage for this disease. Transgenic resistance mediated by RNA silencing against pathogens and pests (HIGS: host-induced gene silencing) has shown promise in other pathosystems but has...
Night is an extraordinary resource. Unlike air, water, or soil, nighttime is a spatio-temporal phenomenon, which leads to many crucial roles. It provides refuge to wildlife species, triggers hormonal and behavioral responses among a wide variety of organisms, and serves as an essential migratory backdrop for species that navigate by...
This thesis examines the recent history of the teaching of argument and its implications in the face of new writing standards being implemented in K-12 classrooms under the Common Core State Standards. The new educational policies will shift the focus of writing instruction onto argument writing as part of students'...
The purpose of this study was to determine the possible problem areas in families with a diet-treated phenylketonuric child. Phenylketonuria is an inborn error of metabolism, which in the past caused mental retardation as well as behavioral disturbances. Initially the discovery of diet therapy eliminated the behavioral disturbances, but not...
Specialized or secondary metabolism is a collection of pathways and small molecules that, while beneficial to an organism, are not strictly necessary for survival. Plants use secondary metabolites to, among other things, attract pollinators, defend against biotic and abiotic stressors, and form symbioses. Natural products from plants have seen an...
Sulfur-coated urea (SCU), a slow release nitrogen fertilizer,
may be economically competitive with conventional fertilizers, but
little is known of the mechanism of urea release from SCU and the
environmental factors which affect the urea release rate. Objectives
of this thesis were: (1) to determine factors which affect the rate...
Ethylene was produced by Cylindrocladium floridanum and C. scoparium in culture. Production was methionine dependent and maximal during the active growth phase of the fungus, beginning shortly after spore germination. More ethylene was produced sooner by C. floridanum than C. scoparium. Ethylene was produced by Cylindrocladium both from active mycelium...