Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Cell signaling under external stimulation is a critical mechanism that governs many biological processes such as cell proliferation, cell migration, and cell apoptosis, etc. For multicellular organisms, the ability to synchronize heterogeneous individual cellular responses through intercellular communication is crucial to maintain normal functionality. However, even though the biological pathways...
The conservation community has long recognized the critical role that agricultural landowners play in efforts to improve fish and wildlife habitat in order to recover threatened and endangered species. In many rural areas dominated by agricultural working landscapes, government agencies like the U.S. Fish and Wildlife Service (USFWS) struggle to...
In the past two decades, the advancement in data collection and storage have led to the accumulation of complex datasets. Consequently, various industries have sought data-driven solutions to predict and detect anomalies. Temporal patterns have emerged as potential features in prediction models that could improve the performance of the identification...
Phytochemicals from cruciferous vegetables, such as broccoli, contain a multitude of bioactive compounds that prevent and suppress cancer and promote optimal health. Some of the health promoting effects of cruciferous vegetables are attributed to a class of compounds known as isothiocyanates (ITCs), a potent nuclear factor erythroid 2–related factor 2...
Dual use pasture systems, sometimes referred to as dual purpose pasture systems, take advantage of the land being used to maximize multiple outputs from a single area. Developing a system to support both production of grazing livestock as well as pollinator health is of increasing importance in pasture-based farming systems....
Power can be defined as the ability to influence the processes, decisions, and outcomes of an activity in favor of the will of a strong actor and its allies. Strategic actions in situations where there is asymmetric power can change the result of decisions. In this research, I will examine...
The Columbia River Gillnetter is the pilot of the Lower Columbia River commercial fishing industry, keeping fishermen and the public in touch with today's important issues.
The Columbia River Gillnetter is the pilot of the Lower Columbia River commercial fishing industry, keeping fishermen and the public in touch with today's important issues.
Understanding the effects of disturbance and restoration on a species’ habitat is essential for understanding the demographic rates and population trends observed in a species. Sufficient habitat provides the space and resources required for survival and successful reproduction, such as food availability, access to water, protection from predators, protection from...
RNAs play important roles in multiple cellular processes, and many of their functions rely on folding to specific structures. To maintain their functions, secondary structures of RNA homologs are conserved across evolution. These conserved structures provide critical targets for diagnostics and therapeutics. Thus, there is a need for developing fast...
This work explores contemporary human-nonhuman relations in the Columbia River Basin of the Pacific Northwest United States. Specifically, it draws from Columbia sea lions to illustrate how salmon-sea lion-human relations are entangled in the North American Wildlife Management model of nonhuman genocide. It follows a multispecies ethnographic design where over...
The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Wildfire impacts have intensified in many ecosystems across the western United States due to the combined impact of fire exclusion, climate change, and land management practices. However, on many of these landscapes, fire is a fundamental ecological process that has shaped vegetation structural and compositional diversity, ecosystem function, landscape pattern,...
Throughout their lifetime individuals are exposed to complex mixtures of chemicals. The study of chemical mixtures is an internationally recognized research priority, but seemingly complex challenge. To reduce the intricacy of studying mixtures, researchers have identified different prioritization methods based on exposure or the toxicity of chemicals. However, understanding the...
Intimate partner violence (IPV) is a prevalent issue that impacts individuals around the world. Mental health professionals need comprehensive and inclusive IPV training to support victims/survivors well. The IPV literature posits several concerns surrounding the quality of IPV training that counselors-in-training (CITs) receive. Obtaining an understanding in how master’s level...
We have sufficient evidence that our historical management of natural resources is not sustainable. Food production is stagnating or declining. Nonrenewable energy sources on which the energy sector has historically depended are being rapidly depleted. Water resources, for which the energy and food sectors compete, are being depleted and impaired....
Continuous Improvement (CI) of academic computing programs is a main requirement of accreditation. Academic computing programs must have a well-documented CI plan in order to be granted accreditation. Based on the existing literature, we developed a comprehensive CI (or 360-CI) model consisting of 8 components: course, curriculum, administration, faculty, research,...
In this dissertation, we consider two problems in number theory, both relating to modular forms. First we consider when a given modular form can be expressed as a quotient in Dedekind's $\eta$ function. Rouse and Webb \cite{RW} have determined the integers $N \leq 500$ such that the graded ring of...
Through comparison and analysis of selected holidays in countries with significantly different features (Kyrgyzstan, Russia, and the United States), this study aims to gauge the impact of holiday celebrations in influencing cultural values in those countries studied. K. Zygulski’s classification system for holidays was applied to divide the holidays of...
Plasma biochemistry and hematology reference intervals are integral health assessment tools in all medical fields, including aquatic animal health. As sablefish (Anoplopoma fimbria) are becoming aquaculturally and economically more important, this manuscript provides essential reference intervals (RI) for their plasma biochemistry and hematology along with reference photomicrographs of blood cells...
The Klamath River Basin (KRB) is one of the most contested basins of the Western U.S. with respect to water. Multiple stakeholders, including Tribes, farmers, state and federal agencies, and environmental advocates, are in frequent conflict over water rights and water use. Removal of the four hydroelectric dams is one...
This study explores how multispecies social networks influence small farmers' perceptions of and responses to climate change across Oregon. Local food sovereignty and food system resilience depend on a robust local food system in which small farms play a critical role. To maintain their viability, small farmers must adapt to...
(Polycyclic aromatic hydrocarbons) PAHs are widespread in the environment, and are derived from both natural and anthropogenic sources. The physicochemical properties of PAHs along with the wide range of PAH sources leads to their persistence in the environment. Since PAHs are ubiquitous, and have the potential to illicit adverse effects,...
The past decade of research has potentiated a revolution in our understanding of mammalian health and evolution by revealing that the gut microbiome plays a central role in mammalian physiology. Our ability to unlock this potential hinges upon the identification of specific groups of gut microbes that elicit effects on...
Climate change is causing people around the world to experience extreme temperature and air pollution events such as wildfires more frequently, and for longer periods of time. Extreme heat events have been widely associated with an increased risk of emergency room visits, occupational heat-related injuries and illnesses, and mortality overall...
Microplastics (<5mm) are a ubiquitous environmental pollutant that have the potential to cause significant harm in many fish species. Therefore, understanding the quantities at which they are being consumed by living organisms is crucial for characterizing risk. There are currently gaps in the microplastic literature regarding microplastic data from finfish...