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The Northern Rubber Boa (Charina bottae) is a small, secretive boa native to the Pacific Northwest. Despite this being possibly the highest latitude boas and one of only two boas native to the continental U.S., it has received surprisingly little attention. Most of the research on the natural history of...
2020 and 2021 brought the first reported outbreaks of salmonellosis epidemiologically linked to dry bulb onions in the United States. Outbreak investigations were not able to implicate a specific source of the contamination but speculated that contaminated water was a significant contributor. The Produce Safety Rule established minimum standards for...
Geospatial data analysis is a multifaceted discipline encompassing the collection, processing, and visualization of diverse datasets. It models and delineates the interactions of people, objects, and phenomena within geographical spaces and predicts patterns based on the relationships between different locations. Despite significant advancements in geospatial data engineering and analytics over...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Research relying on remotely sensed data on land use and deforestation has exploded in recent years. While satellite-based measures have clear advantages in terms of coverage, the presence of measurement error within these products is often overlooked. Here, we detail the econometric implications of these errors when analyzing the determinants...
The RV Ronald H. Brown traveled a section of tropical Atlantic waters northeast of Barbados during January-February 2020 in an international collaboration effort known as Elucidating the Role of Clouds Circulation Coupling in Climate Campaign (EUREC4A). ATOMIC (Atlantic Trade-wind Ocean–Atmosphere Mesoscale Interaction Campaign) was the US contribution to EUREC4A focused...
A secret sharing scheme allows a dealer to distribute a secret with a set of parties, such that only a certain subset of parties can collaborate and learn the shared secret. Traditional secret sharing schemes have been used as building blocks in various subdomains of cryptography. Recently, two new extensions...
One of the pervasive problems arising in our modern, digital world surrounds data breaches where an adversary, through zero-day exploitations, phishing, or old-fashioned social engineering attacks, gains access to a service’s data stores. Our society increasingly relies on these cloud-based services for everything from our taxes to personal communication. As...
While digital inclusivity researchers and software practitioners have been trying to address exclusion biases in Windows, Icons, Menus, and Pointers (WIMP) user interfaces (UIs) for a long time, little has been done to investigate if and how inclusive software design and its methods that have been devised for WIMP UIs...
Physicists solve problems and communicate their work using many external representations, such as equations, words, diagrams, graphs, sketches, pictures, and more. To learn physics, then, students must learn to use external representations. In this dissertation, I present three manuscripts. Each manuscript discusses how upper-division Paradigms in Physics students use multiple...
In the United States, children from underserved racial/ethnic backgrounds encounter greater environmental risk both in terms of the physical environment (e.g., housing quality, access to resources like health services and jobs, and exposure to environmental toxins) and the social environment (e.g., social support, neighborhood crime, racism, and discrimination), due to...
The objective of this dissertation is to enhance the monitoring of forest ecosystems through the utilization of remotely sensed data to address the exigencies posed by the Anthropocene. On a global scale, rising temperatures and fluctuating precipitation patterns have strained forests and produced shifts in natural disturbance regimes. Additionally, the...
Toxin production by cyanobacterial harmful algal blooms (cyanoHABs) in freshwater systems has lasting ecological and human impacts. Nutrients, light availability, hydrology, and microbial community composition impact the frequency and intensity of toxic cyanoHABs. Climate change will exacerbate toxic cyanoHABs, making real time and predictive monitoring a vital tool for managing...
Molten salts have been targeted as a promising coolant for next generation reactors due to their high boiling point, heat capacity, and thermal conductivity. Despite these benefits, molten salt systems present unique materials compatibility issues, highlighted by the aggressive corrosion attack and dealloying typically seen on materials in these environments....
Cabbage maggot, Delia radicum (Diptera: Anthomyiidae) impacts the production of Brassicaceae crops worldwide. The larva feed on the roots of crops causing reductions in yields due to impaired root function and unmarketability of crops. Chemical and cultural management programs are commonly used to control cabbage maggot with varying rates of...
Secure Computation is a powerful tool that enables a set of parties to jointly compute any function over their private inputs, without a trusted third party. Private Set Intersection is a specific case of two-party Secure Computation, where Alice (with private set X) and Bob (with private set Y) specifically...
Ocean deoxygenation is predicted to increase in severity over the next few decades, posing a threat to marine life and fishing economies. Improved predictions of ocean deoxygenation depend on a better understanding of the biogeochemical mechanisms that underly this process. Within the realm of biogeochemical mechanisms, this project specifically investigated...
Expressive motion has been found to be a highly effective tool in communicating intent and motivation in single robot human-robot interaction, but work in exploring how groups of robots can use motion in interactions with humans is relatively nascent. There are many additional complexities to consider expanding from single robot...
Oomycete and fungal pathogens threaten food, fiber, and forests around the world. With climate change, these pathogens are expected to emerge more frequently. Evolution can facilitate their emergence through mechanisms such as mutations that change or expand host range. Characterizing evolutionary mechanisms in plant pathogens will contribute to our ability...
Rhizopogon salebrosus is an abundant ectomycorrhizal fungus common throughout Western North America that forms mutualistic partnerships with Pinus species. Studied for its systematics, use in sapling nurseries, post-fire seedling establishment, and unique evolutionary history, R. salebrosus holds many secrets within its genome. This thesis aims to characterize the mating system,...
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Alexandra Weisberg, Committee Member, representing Department of Botany and Plant
Pathology
This dissertation develops a framework for Curandera feminism, informed by familial healing practices, women of color feminisms, and institutional critique. My research centers my family’s generational Curandera practices. As I honor the call to be critical of the master’s tools, I seek possibilities for institutional change through Curandera feminism. Institutions...
Production of fresh produce takes place outdoors, and therefore, is exposed to many routes of contamination (e.g., soil, contaminated water, manure, etc.) by human pathogens. Although precautions are taken to reduce this risk, pathogens can be regularly introduced to produce handling facilities. To manage the risk of cross-contamination from potentially...
Consistent with its charge under Oregon House Bill 3543, the Oregon Climate Change Research Institute (OCCRI) conducts a biennial assessment of the state of climate change science, including biological, physical, and social science, as it relates to Oregon and the likely effects of climate change on Oregon. This fifth Oregon...
Connectivity of fish populations is a crucial question for fisheries conservation and the development of spatial management plans. Both adult and larval movement define the extent and direction of ecological and evolutionary overlap between geographic regions and, therefore, how we define stocks for management purposes. Within that context, my work...
Within the Pacific Northwest, USA, root diseases of conifers are a major forest health concern. These diseases are primarily caused by basidiomycete fungi. These fungal associates play a vital role in carbon sequestration but also have a significant negative economic impact within the timber industry. As a result, research on...
Ambiguity is a typical element of treaty documents. Its success in accommodating divergent interests, creating boundary conditions leading to dispute prevention and facilitating the conclusion of agreements has been widely recognized, yet less is known whether or not intentional ambiguity or unintentional ambiguity, or perhaps both, lead to challenges or...
RNAs play important roles in multiple cellular processes, and many of their functions rely on folding to specific structures. To maintain their functions, secondary structures of RNA homologs are conserved across evolution. These conserved structures provide critical targets for diagnostics and therapeutics. Thus, there is a need for developing fast...
Simultaneous speech translation (SimulST) is widely useful in many cross-lingual communication scenarios, including multinational conferences and international traveling. Since text-based simultaneous machine translation (SimulMT) has achieved great success in recent years. The conventional cascaded approach for SimulST uses a pipeline of streaming ASR followed by simultaneous MT but suffers from...
Secure two-party computation (2PC) is the task of performing arbitrary calculations on secret inputs provided by two parties, while maintaining secrecy if at least one party is honest. 2PC has been applied to privacy-preserving record linkage and machine learning, in areas such as medicine where maintaining privacy is crucial. One...
The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....
Vital rates and population connectivity are fundamental concepts in animal ecology and such information is critical for successful conservation planning. The Black-backed Woodpecker (Picoides arcticus) is a species of conservation concern because of its strong association with forests recently burned by high-severity wildfire. However, several recent studies have found that...