Background: Pre-genomic and post-genomic studies demonstrate that chlamydiae actively recombine in vitro and
in vivo, although the molecular and cellular biology of this process is not well understood. In this study, we
determined the genome sequence of twelve Chlamydia trachomatis recombinants that were generated in vitro
under antibiotic selection. These...
Capillary pressure-saturation data obtained for unconsolidated porous media with different liquids are examined to investigate the effects of clay-liquid interactions on liquid retention. Liquid retention functions are assumed to reflect the effective pore-size distributions. The hydraulic variables, capillary pressure and saturation, are transformed to account for changes in liquid retention...
The goal of this project was to estimate the total annual cost of salmon recovery efforts throughout the Columbia River Basin from all stakeholders, including direct and indirect costs. How much is spent on salmon recovery efforts each year in the Columbia River Basin? Depending on who you ask, you...
This report summarizes the results of crab studies undertaken during the fall of 1957 and 1958 in the Columbia River estuary. The purpose of this project was to determine the shell condition of the crabs available in this area during the period when crab fishing is prohibited in the ocean,...
Policy development and decision-making play a critical role in natural resource management in the Pacific Northwest. To realise my internship requirements for the Professional Science Masters in Fisheries and Wildlife Administration, I completed internships with: the Oregon Department of Fish and Wildlife (ODFW), Portland State University – National Policy Process...
In 2011 Oregon enacted a public education open enrollment policy that gives students and families the choice of what school to attend, regardless of district lines. Despite the lack of public information, this policy will sunset this school year unless it is further extended during legislative session. This paper attempts...
The inverse electron demand Diels Alder reaction between tetrazines and strained alkenes is an exceptionally useful tool in functionalizing to biomolecules since it is orthogonal to the chemistry of most living systems and have exceptionally high rate constants. In particular reactions between strained trans-cyclooctenes (sTCO) and tetrazines can achieve second...
ROSS (Robotic Oceanographic Surface Sampler) is an autonomous boat, equipped with oceanographic sensors, used for studying the ocean’s surface. One of its advantages over traditional research vessels is its ability to sample near glaciers, an area too dangerous for manned ships. In order to properly ascertain deep ocean heat’s effect...
Climate and terrestrial vegetation have had mutual feedbacks for nearly five hundred million years, yet both are now departing from recent historical norms, with uncertain implications for forest ecosystems. This dissertation outlines the current and potential future climate responses of lichen and bryophyte communities in the United States as part...
Climate and terrestrial vegetation have had mutual feedbacks for nearly five hundred million years, yet both are now departing from recent historical norms, with uncertain implications for forest ecosystems. This dissertation outlines the current and potential future climate responses of lichen and bryophyte communities in the United States as part...
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RobertJ. Smith for the degree of Doctor of Philosophy in Botany and Plant Pathology
presented on May 1
Climate and terrestrial vegetation have had mutual feedbacks for nearly five hundred million years, yet both are now departing from recent historical norms, with uncertain implications for forest ecosystems. This dissertation outlines the current and potential future climate responses of lichen and bryophyte communities in the United States as part...
Empirical studies and theory have identified many early predictors of children's academic achievement and externalizing problems. Moreover, research shows that children's early cognitive abilities and behavioral problems are strong predictors of later academic achievement and externalizing problems. The current dissertation studies extend previous work and unpack how early predictors relate...
Sediments are the major compartment in aquatic environments for many materials of toxic or nutrient concern. The lack of knowledge of the phase associations of toxic metals in sediments is the largest deficiency in our understanding of the environmental hazard posed by metal contamination. This study examined the sedimentary partitioning...
Today’s marketing researchers provide incredible depth of information which explains much consumption behavior in the marketplace. Research into consumer behavior, especially the family of research related to consumer culture theory, provides theory on which cultural phenomena motivate consumers to exhibit the patterns they do in the marketplace. This study uses...
In 2008, the Department of Energy (DOE) and Nuclear Regulatory Commission (NCR) decided that the Next Generation Nuclear Plant (NGNP) would be the Very High Temperature Reactor (VHTR). In support of the licensing and validation effort of the VHTR, Oregon State University was tasked with designing, building, and operating a...
Andesitic and rhyolitic magmatism was active during the mid-
Tertiary (Early Miocene) of the Ash Peak area, southeastern Arizona.
Andesitic magmas of similar composition both preceded and followed the
low- and high-silica rhyolitic magmas. The changes from andesitic to
rhyolitic and back to andesitic volcanism is postulated to be the...
Few aquatic products of the United States have limited competition from imported supplies. This situation existed with the
domestic supply of freshwater crawfish until 1994. The 52 thousand MT round weight domestic production from aquaculture and
capture fisheries experienced major import competition at that point. Imports of value added crawfish...
Executive functions (including attentional shifting/flexibility, working memory, and inhibitory control) are strong predictors of children's early school success (Blair & Razza, 2007; Espy et al., 2004). The current study explored questions related to measurement of executive functions in preschool-aged children. Convergent and predictive validity were assessed for two traditional executive...
This thesis describes investigations of archaeological materials recovered from Site ORBE2, an early-twentieth century historic site in Corvallis, OR. The archaeological materials were found only after construction workers had excavated trenches underneath the still-standing structure on the site in order to install a new foundation. Over 1500 artifacts were recovered...
Interactions between paralytic shellfish poison (PSP) and
components of the butter clam (Saxidomus giganteus) were studied to
determine which component was involved in the binding and retention
of PSP by the butter clam, and to characterize the nature and
strength of the interaction. A simple and accurate assay for PSP...
Multinational corporations must be aware of the business and financial reporting issues that await them abroad. Investors also must have this knowledge in order to adequately interpret the financial information they receive from these companies. This study compares and contrasts the business environments in the US and Mexico, with a...
The identification of sources of point and nonpoint fecal pollution is difficult to determine. Understanding the sources of fecal organisms in quality limited waters could greatly enhance our ability to restore and protect the water quality and habitat of these systems. Antibiotic resistance patterns of fecal streptococci bacteria were analyzed...
To assess the consequences of increased recreational activity on bald eagles (Haliaeetus leucocephalus), we studied factors that influenced their behavior and reproductive success in the Gulkana River basin, Alaska, from 1989 to 1993. Both extrinsic and intrinsic factors were associated with reproductive success. Productivity averaged 0.86 young fledged per occupied...
The relationships among total water potential (psi), osmotic potential ([pi]), pressure potential (P), and relative water content (R*) were determined during four consecutive soil drying cycles for shoots of Douglas-fir (Pseudotsuga menziesii [Mirb.] Franco) seedlings. In each cycle, seedlings were sampled for pressure-volume determinations as soil water was depleted gradually...
The dynamics of stands In old-growth ponderosa pine (Pinus
ponderosa) forests on the eastern flank of the central Oregon
Cascades are Investigated. Age structure and spatial pattern of
ponderosa pine within the Pringle Falls Experimental Forest
Research Natural Area coupled with the fire history of the area
aid In Interpreting...
Multinational corporations must be aware of the business and financial reporting issues
that await them abroad. Investors also must have this knowledge in order to adequately
interpret the financial information they receive from these companies. This study
compares and contrasts the business environments in the US and Mexico, with a...
Radial colony growth of three isolates of Gliocladium roseum and three isolates of Bottytis cinerea were measured on 1/4 strength potato dextrose agar amended with concentrations of NaHCO₃ ranging from 0-2% (w/v). Compared to the control, reductions in colony diameter of the B. cinerea isolates ranged from 60-79% and 73-89%...
A succession of basaltic lavas, volcaniclastic sediments, and lignite beds in the Holmatindur region of eastern Iceland provides the means for tying magnetic reversal stratigraphy and a record of major North Atlantic cooling to a precise radiometric timescale. A prominent part of the section is the Holmatindur classic bed, which...
Eighty-one microbial species isolated from seafoods and other marine sources were examined to determine the extent of interactions among these species. Spot-plates, cross-plates, and concurrent growth experiments at 7, 15, 20, and 30 C indicated that Lactobacillus species were capable of inhibiting other microorganisms. Lactobacillus species isolated from oysters and...
The bluffs and plateaus of the eastern Columbia River are floristically rich and ecologically intricate. A previous descriptive study of the unique scabland vegetation on the Gov. Tom McCall Preserve at Rowena Plateau in Oregon included delineation of several distinct or intergrading native and non-native vegetation units. In this study...
A new class of nearshore waves based on the shear instability of a steady longshore current is discussed. The dynamics depend on the conservation of potential vorticity but with the background vorticity field, traditionally the role of Coriolis in larger scale flows, supplied by the shear structure of the longshore...
The files are zipped and will need to be unzipped prior to viewing. Images are contained within 8 sub-folders: Crystal Creek Riparian Sep 2010, Crystal Creek Uplands Sep 2010, Lamar River Riparian Sep 2010, Lamar River Uplands Sep 2010, Rose Creek Riparian Sep 2010, Rose Creek Uplands Set 2010, Slough...
The 1995/96 reintroduction of gray wolves (Canis lupus) into Yellowstone National Park
after a 70 year absence has allowed for studies of tri-trophic cascades involving wolves, elk
(Cervus elaphus), and plant species such as aspen (Populus tremuloides), cottonwoods (Populus
spp.), and willows (Salix spp.). To investigate the status of this...
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Trophic cascades in Yellowstone: The first 15 years after wolf reintroduction
William J. Ripple ⇑, Robert
Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate
vegetation shifts due to climate change, air pollution or changes in vascular plant community structure. Techniques for
estimating lichen biomass have traditionally required destructive harvesting that is painstaking and impractical, so we...
Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate
vegetation shifts due to climate change, air pollution or changes in vascular plant community structure. Techniques for
estimating lichen biomass have traditionally required destructive harvesting that is painstaking and impractical, so we...
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Abbey Rosso1, Peter Neitlich1*, RobertJ. Smith2
1 National Park Service, Winthrop, Washington, United
Plagiobothrys hirtus is Oregon’s top priority for endangered plant species recovery, and the wetlands of Douglas County provide the only habitat for this plant in the world. The goal is to downlist this species from endangered to threatened, and in order to do that, existing populations must be protected, and...
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Plagiobothrys hirtus (Boraginaceae), the rough popcornflower
Courtney Wilson, Kelly Amsberry, and Dr. RobertJ
Plagiobothrys hirtus is Oregon’s top priority for endangered plant species recovery, and the wetlands of Douglas County provide the only habitat for this plant in the world. The goal is to downlist this species from endangered to threatened, and in order to do that, existing populations must be protected, and...
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, and Dr. RobertJ. Meinke, Oregon Department of Agriculture, Oregon State University
Literature Cited
Mortality due to infectious diseases is seldom reported in the Greater Sage-Grouse (Centrocercus urophasianus). A case of necrotic enteritis associated with Clostridium perfringens type A is described in a free-ranging adult male sage-grouse in eastern Oregon. Clostridial enteritis is known to cause outbreaks of mortality in various domestic and wild...
Annual recruitment of the New Zealand longfin eel (Anguilla dieffenbachii) has decreased by around 75 percent since heavy levels of commercial fishing began in the early 1970s. Given the unsustainability of existing regulatory policy, a deterministic multiple-cohort bioeconomic model is developed and applied to this system to gain insight into...
Data attacks on state estimation modify part of system
measurements such that the tempered measurements cause
incorrect system state estimates. Attack techniques proposed
in the literature often require detailed knowledge of system
parameters. Such information is difficult to acquire in practice.
The subspace methods presented in this paper, on the...
Terrestrial lichen biomass is an important indicator of forage availability for caribou in northern regions, and can indicate vegetation shifts due to climate change, air pollution or changes in vascular plant community structure. Techniques for estimating lichen biomass have traditionally required destructive harvesting that is painstaking and impractical, so we...
Idealized numerical simulations utilizing the Regional Ocean Modeling System (ROMS) are carried out to examine the response of buoyant river plume systems to offshore-directed wind stresses. It is found that after a few inertial periods of wind forcing the plume becomes detached from the coast and reaches a steady state...
We have investigated the depinning process of magnetic flux vortices in twinned crystals of YBa₂Cu₃O₇₋δ in intermediate applied magnetic fields parallel to the crystallographic c axis through precise resistivity measurements before and after fast-neutron irradiation. Of particular interest for each field is the power-law dependence of the electric field on...
