Methane fluxes into the oceans are largely dependent on the methane phase as it migrates upward through the sediments. Here we document decoupled methane transport by gaseous and aqueous phases in Storfjordrenna (offshore Svalbard) and propose a three-stage evolution model for active seepage in the region where gas hydrates are...
Pseudomonas syringae is a phylogenetically diverse species of Gram-negative bacterial plant pathogens responsible for crop diseases around the world. The HrpL sigma factor drives expression of the major P. syringae virulence regulon. HrpL controls expression of the genes encoding the structural and functional components of the type III secretion system...
Understanding of hydroclimatic processes in Africa has been hindered by the lack of in situ precipitation measurements. Satellite-based observations, in particular, the TRMM Multisatellite Precipitation Analysis (TMPA) have been pivotal to filling this void. The recently released Integrated Multisatellite Retrievals for GPM (IMERG) project aims to continue the legacy of...
Abstract:
Resource managers and policy face challenges in forecasting the demand for natural resources replenishment (where possible) of natural resources due to changes in human lifestyle, population change and economic development. The year 2020 demonstrated this challenge on several fronts, including the realm of natural resources. Additionally, much competition for...
This research examined the potential for using peanut husk as a fiber alternative to wood in the production of melamine-formaldehyde (MF) particleboard. MF resin was used to produce panels with one, three, six, nine or 12 percent resin contents. Modulus of Rupture (MOR), Modulus of Elasticity (MOE), Internal Bond (IB)...
Across the globe, Marine Protected Areas (MPAs) have been established to protect biodiversity, sustain fisheries, and preserve cultural resources. However, there exist broad differences among MPAs with respect to their establishment stage and protective regulations, making it difficult to quantify how much ocean protection is actually occurring. This thesis utilizes...
As important ecological cornerstones, coral reefs face threats from a myriad of sources, such as global climate change, and importantly, disease, the latter often as a result of microbial pathogens. An understudied group of major corals, fire corals, and their even less understood microbiome present an opportunity to learn more...
Accurately predicting key combustion phenomena in reactive-flow simulations, e.g., lean blow-out, extinction/ignition limits and pollutant formation, necessitates the use of detailed chemical kinetics. The large size and high levels of numerical stiffness typically present in chemical kinetic models relevant to transportation/power-generation applications make the efficient evaluation/factorization of the chemical kinetic...
Presented at the annual meeting of the Northwest Archivists, this talk discusses the workflows deployed by the Oregon State University Libraries Special Collections and Archives Research Center (SCARC) to provide access to digitized moving images materials. The presentation also describes the ways in which SCARC intends to use new features...
Snags are important habitat features for many forest-dwelling species, so reductions in the number of snags can lead to the loss of biodiversity in forest ecosystems. Intentional snag creation is often used in managed forests to mitigate the long-term declines of naturally created snags, yet information regarding the use of...
As of September 2017, most information about wetland plant associations in southwestern Oregon can only be found in unpublished reports that are not available in libraries or on the Internet. Jon Titus's unpublished summaries of plot data from vernal pools, serpentine fens, and other wetlands that he sampled in the...
Data acquisition is the foundation of sound decision making. Therefore, after the work of the empiricist who laid the philosophical foundation of the data driven inference (Berkeley, 2003; Hume, 1902; Locke, 1860), significant efforts were carried in developing methods aiming at acquiring representative information for describing reality. The main instrument...
Gene regulatory networks are commonly used for modeling biological processes and revealing underlying molecular mechanisms. The reconstruction of gene regulatory networks from observational data is a challenging task, especially considering the large number of players (e.g. genes) involved and the small number of biological replicates available for analysis. Herein, we...
The relationship between livelihoods and forest use is one of the main challenges facing wildlife and habitat conservation in developing countries. Poor residents in forest-adjacent areas are typically perceived to be the main forest users, with use often deemed illegal. However, there is still a limited understanding of livelihood constraints...
Intracellular pH (pH(i)) imaging is of paramount importance for life sciences. In this work, we implement the ultrafast electronic and stimulated Raman spectroscopies to unravel the fluorescence mechanism of an excitation-ratiometric pH(i) indicator in basic aqueous solution. After photoexcitation of the pH(i) indicator HPTS, a hidden charge-transfer (CT) state following...
When running for a political office, a candidate’s platform is important for the voter to understand what the that individual believes. Candidates do not always lay out a concrete platform and tend to stay away from salient issues, such as climate change and its effects, and run on platforms that...
Growing evidence indicates that disrupting the microbial community that comprises the intestinal tract, known as the gut microbiome, can contribute to the development or severity of disease. As a result, it is important to discern the agents responsible for microbiome disruption. While animals are frequently exposed to a diverse array...
Common ecological restoration treatments such as thinning trees and prescribed burning could result in changes to soil fungal communities and changes to the function of those communities. Ectomycorrhizal fungi are especially likely to be affected as they are symbionts on plant roots and exhibit host and niche preferences. Ectomycorrhizal fungi...
My thesis in Environmental Arts and Humanities concerned the idea of animal language, as well as other posthuman ideas around animality and indistinction. I also explored virtual space as it relates to human identity, our notions of reality and perception, and the way contemporary digital artists approach animal subjectivity in...
Cervical cancer is the fourth most common cancer in women worldwide with human papillomavirus (HPV) being the main cause the disease. Chromosomal amplifications have been identified as a source of upregulation for cervical cancer driver genes but cannot fully explain increased expression of immune genes in invasive carcinoma. Insight into...