This study focuses on the tradeoffs that exist for managing forested landscapes for biodiversity and timber production. Tradeoff evaluation is important to natural resource managers so they can understand the benefits and costs of alternative management prescriptions. The study examines three watersheds in the Oregon Coast Range and 166 terrestrial...
This study focuses on the tradeoffs that exist for managing forested landscapes for biodiversity and timber production. Tradeoff evaluation is important to natural resource managers so they can understand the benefits and costs of alternative management prescriptions. The study examines three watersheds in the Oregon Coast Range and 166 terrestrial...
This study focuses on the tradeoffs that exist for managing forested landscapes for biodiversity and timber production. Tradeoff evaluation is important to natural resource managers so they can understand the benefits and costs of alternative management prescriptions. The study examines three watersheds in the Oregon Coast Range and 166 terrestrial...
Lipid peroxidation is believed to be an important
process in the development of cellular injury. In
addition to the degradation of biological membranes,
increasing evidence indicates that lipid peroxidation can
alter the structure and function of DMA.
The present study examines the peroxidation of
nuclear membranes and the capacity of...
A publication containing advice on a wide range of gardening topics, including composting, container gardens, fall/winter gardens, fertilizing, insect pests, plant diseases, planting guidelines, raised beds, site selection, slugs, soil improvement, tilling, warm-season crops, watering, and weeds. Includes regional tips for various parts of Oregon.
Apologia is a rhetorical genre of self-defense. As such, apologetic discourse
involves a response to an attack upon an individual's character or worth as a human being.
Los Angeles Police Detective Mark Fuhrman encountered such a attack during the 0.J.
Simpson murder trial. The purpose of this analysis is to...
Because many coral-reef fishes are observable in situ, are amenable to transplantation, have small home ranges and short generation times, they provide a excellent system to investigate many topics within general ecology, fisheries biology, and conservation biology. The primary goal of this dissertation was to use the coral-reef fishes system...
Drosophila suzukii Matsumura (Diptera: Drosophilidae) utilizes ‘Himalaya’ blackberry, Rubus armeniacus
Focke (Rosaceae), as a host and may invade berry and stone fruit crops from field margins
containing this invasive weed. Laboratory and semi-field studies were conducted to determine (1)
the persistence of protein marks including 10% chicken egg whites (egg...
The purpose of this watershed assessment is to provide an inventory and characterization of
watershed conditions in the Wilson River watershed and to provide recommendations that
address the issues of water quality, fisheries and fish habitat, and watershed hydrology.
Recommendations are provided in this watershed analysis to identify actions and management decisions on the part of BLM that might improve watershed health in the Trask River watershed.
Diet variation among individuals within populations is widespread. Often diet differences among individuals are attributable to obvious differences among individuals such as age, sex, or morphology. However, growing evidence suggests that individual diet variation is also common among seemingly identical individuals within populations. This phenomenon has been termed individual diet...
This thesis is the transformation of Book IV of Milton’s epic poem Paradise Lost into graphic novel format. Transforming Milton’s epic Paradise Lost into a graphic novel offers the advantages of making the material more accessible for students, and easier to understand. The aim is to make the poem more...
There is increasing awareness that human activities are altering the ways that natural systems operate and that local shifts in species composition and abundance can lead to abrupt and irreversible global change. Therefore, understanding the processes that buffer biological communities from critical shifts and how our actions affect natural stabilizing...
This data contains results from direct numerical simulations of premixed, three-dimensional, turbulent toluene/air flames, using the multicomponent and mixture-averaged diffusion models. In particular, this dataset contains information about diffusion flux angles and magnitudes. We performed the simulations using the finite-difference code NGA; simulation details are described completely in the associated...
Forests face health threats from pests and diseases (e.g., mountain pine beetle, emerald ash borer, chestnut blight [CB], Swiss needle cast), and other issues such as climate change. Interventions such as genetic engineering (GE) have shown promise for mitigating some of these threats. CB, for example, has impacted most American...
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Mark D. Needham
Forests face health threats from pests and diseases (e.g., mountain pine
Biological invasions have been identified as one of the prominent drivers of global environmental change. In particular, invasive predators typically have substantial negative effects on populations of native prey, even driving species to extinction in extreme cases. However, beyond direct predatory effects, little is understood regarding the specific mechanisms by...
The accessions used to create the Snap Bean Diversity Panel were 150 snap bean (Phaseolus vulgaris) cultivars and breeding lines selected from North American and European germplasm to create a population that is representative of the snap bean market class from a historical and geographical viewpoint. This panel was developed...
We examined the behavioral and physiological responses of wild
and hatchery-reared cutthroat trout Oncorhynchus clarki subjected to
a single electroshock, electroshock plus marking, and multiple
electroshocking in natural and artificial streams. In a natural
stream, trout released after capture by electrofishing and marking
showed distinct behavioral changes: fish immediately sought...
I used program CAPTURE to analyze 1,535 data sets for 33 North American species of small mammals for sources of variation in capture probabilities and to characterize species-specific responses to markrecapture trapping. CAPTURE incorporates seven models to account for all possible combinations of heterogeneity (h), behavioral response (b), and time...
Visitor behavior research has become an essential
component to many museum programs. Since its opening to the
public in 1965, Oregon State University's Mark O. Hatfield
Marine Science Center Aquarium in Newport, it has been
visited by millions of people. A clear understanding of who
this audience was and what...
Signal transduction within and between cells is at the core of biological activity in all living systems. Signaling networks are required for regulating biological functions, including growth, development and survival. Deregulation of signaling cascades has been linked to chronic and acute diseases and disorders This thesis focuses on mass spectrometry...
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in two essential micronutrients, vitamins E and C, on the
proteome biology. A label-free proteomics
Recent publications about the rising cost of college textbooks by the Public Interest Research and the US Government Accountability Office have caused student groups across the country to explore novel ways to address the problem. Students, publishers, bookstores and academic libraries, because of their role of managing course reserves, are...
In this watershed assessment, the authors of the report summarized current conditions and data gaps within the Necanicum River watershed to help to identify how current and past resource management is impacting aquatic resources.
An anemia of juvenile chinook salmon (Oncorhynchus tshawytscha) is described and stages of development separated by recognizable syndromes. A vitamin E-deficient diet of low rancidity produced a severe microcytic anemia with strong immature red cell response and granulocytosis occurring 2 to 4 weeks before a drop in hemoglobin and hematocrit...
Vitamin E was first described in 1922 as an unknown factor required for impregnated rats to carry their offspring to term. In fact, when vitamin E was chemically characterized it was given the name "tocopherol" derived from the Greek: tokos = childbirth; phero = to bear; and –ol, indicating an...
When Biosand filters cannot be constructed with crushed quarry rock due to resource limitations, a suitable alternative filter media is needed. In this research, two crushed quarry rock alternatives were examined. Three bench-scale Biosand filters with crushed rock, beach sand, and heat-treated beach sand media were simultaneously dosed with Willamette...
As concern over global warming intensifies, sequestration and storage of atmospheric CO2 has become an important scientific and policy issue. Confusion persists, however, over interpretation of forest carbon (C) source-sink dynamics, in part because conclusions drawn depend on temporal and spatial scales of analysis (e.g. day-week
scale vs. successional-scale), type...
The number of people traveling to other countries to volunteer for conservation or humanitarian projects has increased dramatically in the past three decades. Despite substantial interest in volunteer tourism, few researchers have examined: (a) the role of promotional material (e.g., brochures, internet websites) in motivating volunteers; (b) factors that attract...
It has been suggested that cellular damage from oxygen radicals is one of the processes leading to cardio-vascular disease and cancer. Natural antioxidants prevent uncontrolled oxidative reactions by decreasing molecular oxygen levels, scavenging chain-initiating and chain-propagating free radicals, chelating metals, or decomposing peroxides. Beer is rich in antioxidants, derived both...
Mechanisms of motor control and function are interesting to those from the medical, athletic training and sports performance professions primarily during the development of conditioning and rehabilitation programs. The aim of this study was to assess spinal control mechanisms in two groups of explosively trained, female athletes from a NCAA...
Although only a minority of introduced species become established and have noticeable consequences in their new communities, some can displace native species, alter food webs, and cause local extinctions. Studying these invasive species can provide new insights into basic ecological questions as well as inform management strategies. Pacific lionfish (Pterois...
Protected area creation, including creation of marine reserves (MRs), is increasingly molded by ecosystem based management (EBM) that integrates biological and social information in the pre and post establishment phases. Collecting social data from large and representative samples of the public (as opposed to other stakeholder groups) before establishing a...
In Oregon, property tax revolts and school equalization measures have led to increasingly unstable and more non-discretionary public funding for schools. As a result, public schools are turning to private donations to provide both basic and supplemental educational opportunities. Some schools and districts are raising hundreds of thousands of dollars,...
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MarkE. Edwards
In Oregon, property tax revolts and school equalization measures have
This study examined the effect of fire regime on coarse woody debris (CWD) mass using a combination of field data and modeling. The objectives were to use field sampling to determine how CWD differs between two areas that have had different fire regimes, and investigate how fire frequency and severity,...
Many communities emphasize participatory involvement in local development or reinvention efforts. Recognizing barriers among specific groups could help community leaders identify what may be constraining underrepresented groups from joining in. Utilizing data from the Social Capital Benchmark Survey, this research examined identified “barriers” to community involvement among individuals in rural...
Two novel and highly related C₂H₂ zinc finger proteins (CTIP1/BCL11A/EVI9 and CTIP2/BCL11B/Rit1) have been implicated in COUP-TF signaling, etiology of myeloid and lymphoid malignancies, and hematopoietic cell development. However, the precise cellular function(s) and the contribution of these proteins to neoplastic processes and hematopoietic cell development remain unknown. The goal...
CTIP2, a novel C2H2 zinc finger protein, is a transcriptional repressor that functions by at least two mechanisms. CTIP2 interacts with and stimulates transcriptional repression mediated by COUP-TF family members. CTIP2 also represses transcription independently of COUP-TF proteins by direct, sequence-specific DNA binding activity. CTIP2 has been implicated in lymphoid...
This thesis examines the Schultz Fire as a case study to explain the complex history of fire suppression management in America’s forests, and to gain further understanding of how management practices have affected the increase in fire severity levels and how forests respond to such a disturbance. The thesis objectives...
This research investigates the physiological and transcriptional responses of Nitrosomonas europaea when exposed to chlorinated aromatic compounds and heavy metals under varying environmental conditions. It was found that transcriptional responses of identified sentinel genes correlate well with nitrification inhibition. Sorption of metals to biomass was also investigated and found not...
Retinoic acid (RA) exerts important effects in the processes of vertebrate development, cellular growth and differentiation, and homeostasis. However, the mechanisms of action of RA in the control of cellular and developmental processes are incompletely understood, as the retinoid target genes have not been fully characterized. The goal of these...
Ecosystems are highly heterogeneous systems subjected to important levels of environmental variability; however, it is common in terrestrial biogeochemical models to assume homogeneous properties of the elements of the system or constant environmental conditions. For some processes, heterogeneity in these models is treated very simplistically, but there is not much...
Coarse woody debris (CWD) decomposition in the Russian boreal forests of the southern taiga zone was studied at four sites located near St. Petersburg in Northwestern Russia, Krasnoyarsk in Eastern Siberia, lrkutsk in the Baikal region, and Khabarovsk in the Russian Far East. This study was part of a broader...
Nitrosomonas europaea carries out the first step in the biological nitrogen removal process in wastewater treatment by oxidizing ammonia to nitrite. It has been shown to be sensitive to a wide range of contaminants. The antibiotic oxytetracycline and the heavy metals chromium and silver have been found in wastewater influent....
Despite the importance of tropical forest ecosystems in the global carbon cycle, there have been few studies of carbon dynamics in this biome. The magnitude of carbon stocks in the tropics and their changes over time are poorly known since ground-based observations are lacking. In this study, total carbon stocks...
1,4-Dioxane (dioxane) is a probable human carcinogen and is often found comingled with chlorinated aliphatic hydrocarbon (CAH) contamination since dioxane is used as a stabilizer in CAH solutions. Dioxane is miscible in water, has a low K[subscript ow], low H[subscript cc], and is highly recalcitrant in the environment. The presence...
Plant litter decomposition plays an important role in the global carbon cycle, and contributes large amounts of carbon to soils, which store more carbon than any other terrestrial pool of organic matter. Decomposition plays a fundamental role in nutrient cycling and alters soil properties that shape plant community composition and...
The primary objective of this study was to evaluate the rates of nitrate removal for a nitrate containing, low organic carbon wastewater interacting with four different carbon-containing solid substrates (alder woodchips, corn silage, manure and woodchip biochar). Batch systems were tested for nitrate removal, and systems with a combination of...
Changes in climate caused by increased concentrations of carbon dioxide (CO₂) in the Earth’s atmosphere have led land and ocean surface temperatures to increase by 0.85°C and sea level to increase by 19 cm relative to preindustrial times. Global climate change will lead to further alterations in mean temperature and...
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MarkE. Harmon
Changes in climate caused by increased concentrations of carbon dioxide (CO2
To understand human social environments and interaction, it is often necessary to examine them in creative and metaphorical terms. In this thesis, a model of chemical interaction, atomic and molecular bonding, and the role of electrons, nuclei, and other chemical principles are used to describe the social environment of human...
The rapid accumulation of polyethylene terephthalate (PET) plastic waste caused by disposable plastic water bottle use is a worldwide problem that will continue to affect our environment, economy and society unless new methods of reduction and degradation are explored. The large amounts of energy and resources that are required during...
1,1,1-Tricholorethane (1,1,1-TCA), a widely used industrial solvents, is one of the most common subsurface contaminants. Transformation processes in the subsurface can result in the production of 1,1-dichioroethane (1,1-DCA) and 1,1- dichioroethene (l,1-DCE) from 1,1,1-TCA contamination, resulting in plumes of mixed chlorinated aliphatic hydrocarbons (CAHs). A butane-utilizing microorganism, strain 1 83BP,...
Concentration of carbon dioxide (CO₂) in the atmosphere has increased over the past 150 years. Because CO₂ is one of a number of radiatively active gases, there is concern that global temperatures will rise and climatic conditions will change. Recent research indicates northern hemisphere forests may currently be accumulating carbon...
A mechanistic simulation model of nitrogen fixation in dead wood was developed to help synthesize knowledge, develop hypotheses, and estimate rates of nitrogen fixation in the Pacific Northwest. In this model nitrogen fixation is directly controlled by log substrate, temperature, moisture, and oxygen content. Respiration and diffusion of
oxygen indirectly...
Controls of substrate quality, temperature, and moisture on woody root decomposition in the Pacific Northwest were explored using chronosequences, time series, laboratory incubations, and simulation modeling approaches at three sites: Cascade Head
(CAH), H. J. Andrews (HJA), and Pringle Falls Experimental Forests (PRF). In the chronosequence study, a structural component-oriented...
The United States is struggling to improve the educational attainment of high school students in order to meet workforce needs and remain internationally competitive. Fewer than 80% of U.S. students graduate from high school despite 30 years of policy initiatives aimed at improving graduation rates. This study focuses on completion...
Reducing the cover of non-native species is one of the challenges of ecosystem restoration. The goal of this study is to identify native species traits that will increase native species cover and reduce non-native species cover in the first growing season at upland and wetland prairie restoration sites. Native and...
Although there is research into student learning on the Web and other computer-supported environments, there has been little investigation into the practice and pedagogy of university Web teachers. This qualitative study used a series of interviews of eight higher education faculty to gather data on their Web teaching practices, and...
Grandfather Mountain (North Carolina) has been attracting people from all over the world since it opened as a park in 1952. In addition to its mild summer climate, extreme weather patterns, and breathtaking views, Grandfather Mountain is an area of high ecological significance. Although the Grandfather Mountain Steward Foundation (GMSF)...
Forest managers of public lands in western Oregon and Washington have become increasingly interested in creating additional conifer cohorts in young, even-aged, second-growth Douglas-fir stands. The purpose of our research was to assess the establishment, survival, and growth of naturally-regenerated and underplanted conifers 10-13 years after overstory thinning and understory...
Predatory lionfishes (Pterois volitans and P. miles) were introduced to Florida waters during the mid to late 1980s, and eventually established self-sustaining breeding populations in the tropical western Atlantic. These invasive species are now widespread along the southeastern seaboard of the United States, across the Caribbean Sea, and in the...
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AN ABSTRACT OF THE DISSERTATION OF
Mark A. Albins for
Oregon’s fishing community is concerned about the potential effects that wave energy conversion devices could have on Dungeness crab movement, behavior and harvests. Though crabbing has been a mainstay of West Coast economies for decades, little information has been collected or analyzed on adult Dungeness crab movement, in general, and...
The pharmacokinetics of two antimicrobials were investigated in alpacas. Six healthy alpacas were each administered a single dose of 10 mg/kg of oxytetracycline by IV injection and IM injection. In addition, a single dose of 20 mg/kg of florfenicol by IV administration was given to alpacas in a separate study....
Snow is a critical component of global climate regulation and provides water resources to over one billion people worldwide. Yet current measurement methods and modeling techniques lack the ability to fully capture snow characteristics such as snow water equivalent (SWE), snow depth, and density variable landscapes. In recent years, the...
As recreation and tourism visitation increases and government budgets decrease, public
land management agencies are using private commercial operators as an alternative
source of offering products and services. Changes and trends in commercial outdoor
recreation and tourism such as a large scale increase in the number of visitors can affect...
In the Pacific Northwest (PNW), concern about the impacts of climate and land cover change on water resources, flood-generating processes, and ecosystem dynamics emphasize the need for a mechanistic understanding of the interactions between forest canopies and hydrological processes. A detailed measurement and modeling program during the 1999 and 2000...
The accurate simulation of snowpack deposition and ablation beneath forested areas is confounded by the fact that the vegetation canopy strongly affects the snow surface energy balance. The canopy alters the radiation balance of the snowcover, and reduces the wind speed at the snow surface. Data collected as part of...
How the direct and indirect effects of species interactions cascade to affect community structure, functioning, and stability is a fundamental question in ecology. In temperate kelp forests, species interactions, in conjunction with environmental processes, produce rich spatiotemporal dynamics.
Arguably the most dramatic of these are abrupt shifts in community state,...
Temperature data received post mortem in 2008–13 from 15 of 36 juvenile Steller sea lions (Eumetopias jubatus) that had been surgically implanted in 2005–11 with dual life history transmitters (LHX tags) indicated that all 15 animals died by predation. In 3 of those 15 cases, at least 1 of the...
The condition of the sagebrush ecosystem has been declining in the Western United States, and greater sage-grouse (Centrocercus urophasianus), a sagebrush-obligate species, has experienced concurrent decreases in distribution and population numbers. This has prompted substantial research and management over the past two decades to improve the understanding of sage-grouse and...
BCL11B is a transcriptional regulatory protein that plays essential roles during mouse embryonic development. BCL11B is expressed and functions in the immune and nervous systems as well as within ectodermal organs. Multiple studies have characterized the roles of BCL11B in T cells, brain, and skin. However, very little is known...
Peroxisome proliferator-activated receptors (PPARs) are members of a
large group of ligand-regulated transcription factors that includes nuclear
receptors for steroid and thyroid hormones, retinoids and vitamin D₃.
Synthetic fibrates and thiazolidinediones that bind to and activate PPARs are
used efficaciously in humans to remedy hypertriglyceridemia and non-insulin
dependent diabetes mellitus,...
Studies using the pluripotent embryonic carcinoma cell line, P19, as a retinoic acid (RA)-responsive model system have been instrumental towards our understanding of the RA-dependent signaling pathways in development and homeostasis. Grp1-associated scaffold protein (GRASP; also known as Tamalin) was first identified by our group, as a gene robustly induced...
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Mark Leid
Studies using the pluripotent embryonic carcinoma cell line, P19, as a
Wine is known to have been enjoyed since ancient times. Although early civilizations where unaware of scientific mechanisms of the properties of wine, empirical methods allowed them knowledge of its intoxicating effects as well as its healthful properties. These properties lead the ancients to use wine for many purposes including...
Tropical coastal and marine areas are popular for recreation, leisure, and tourism activities, but these activities can cause social (e.g., crowding), ecological (e.g., coral trampling), and managerial impacts (e.g., pressure on facilities). The concept of norms is one approach for examining user acceptance or tolerance of these impacts. This dissertation...
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Mark D. Needham
Tropical coastal and marine areas are popular for recreation, leisure
PURPOSE: The purpose of this research was to quantify the effects of a warm-up with static or dynamic stretching on countermovement jump height, reaction time, muscle onsets for tibialis anterior (TA) and vastus lateralis (VL), and low back/ hamstring flexibility.
METHODS: Twenty one recreationally-active males (24.4 ± 4.5 yrs), recruited...
The lionfish (Pterois volitans) is a successful invasive predator with large impacts on native fish populations in the western Atlantic. Lionfish predation may affect competition between prey species so it is important to understand whether lionfish display preferences between prey species. I investigated lionfish and native graysby grouper prey preference...
A central challenge for ecology is to understand the dynamic nature of species interactions. A classic approach to community ecology assumes that individuals within a species are functionally identical and that consumer-resource dynamics can be predicted solely by using species abundances. However, one species can consist of multiple functional groups,...
People in the US and Europe eat the most meat worldwide, lose or waste about 20% of this product overall, and they waste the most food per capita. Food waste is currently addressed as an issue of volume, so programs and policies target foods that are wasted more by weight...
Estimates of potential carbon (C) storage can be used to constrain predictions of future carbon sequestration and to understand the degree to which disturbances, both natural aid anthropogenic, affect C storage. An upper bound on C storage in the Pacific Northwest (PNW) of the United States was estimated using field...
Oregon has one of the five highest homeless occupancy rates in the U.S., according to the Annual Homeless Assessment Report (2021). Using the current governor of Oregon’s (Tina Kotek) plan to decrease homelessness, which focuses primarily on housing developments and strategies, this study will first examine the merits of permanent...
CTIP2 is a C2H2 zinc finger transcription factor that plays important yet poorly understood roles in mouse development. CTIP2 is known to be highly expressed in the central nervous system, skin and T lymphocytes during embryogenesis. CTIP2-null mice die perinatally of unknown causes and exhibit defects in multiple organ systems...
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Mark Leid
CTIP2 is a C2H2 zinc finger transcription factor that plays important yet poorly
The purpose of this study is to illuminate the role,
the function, and the ironic outcome of the Victory in
Vietnam Committee's campaign pamphlet to recall Senator
Frank Church of Idaho in 1967. The VVC's political
strategy was to build credibility with the media through
the recall pamphlet. The analysis...
The State of California uses the Resource Family Approval Program (RFA) to approve resource family homes (foster and adoptive homes). This program is the responsibility of each county to implement and manage. The RFA program was created to be much more family-friendly and provide an approval process that puts the...
Extending the flight time of an autonomous unmanned air vehicle by soaring is
considered. A suboptimal controller is developed and successful static soaring is
demonstrated with a 6 degree of freedom glider model. Altitude gain rates of between
¼ and ½ m/s are achieved with this simple implementation.
A hybrid...
The work deals with the subject of designing for Native Americans. The first part of the project broadly examines the field of graphic design as it relates to Native Americans, discussing the lack of Native voices in graphic design, what designing for Native Americans can entail, the role of Native...
Pets are reshaping human lifestyles in countries around the world. More people than ever include pets as part of their family. Organizations including the Society for Companion Animal Studies (SCAS) and the Human Animal Bond Research Institute (HABRI) have conducted and sponsored a wealth of research into human-companion animal interactions...