Heterogeneous porous material represents a persistent challenge in the field of engineering. Microscale properties such as the porosity and microchannel torturosity significantly control the macroscale transport characteristics of homogeneous porous medium. Additional complexity is introduced when these small-scale features vary in space. Examples of heterogeneous porous systems include artificial body...
This repository contains the data associated with the paper "Steady-State Diffusion in a Spatially Varying Porous Medium" to be published in Advances in Water Resources. These data include the information and program scripts required to reproduce the results reported in the publication. In particular, the data set includes (1) COMSOL...
This thesis presents the idea for FORIN (Forest Roads Inventory), a computerized forest roads inventory system. FORIN is a tool to more efficiently inventory and manage information of forest roads. FORIN is intended for use by field personnel, who will use pen-based computers to improve productivity, accuracy of inventories, to...
Full Text:
AN ABSTRACT OF TILE THESIS OF
Peter (Pece) V. Gorsevski for the
Modern product design drives the boundaries of innovation by encompassing complex Design-for-X objectives, and the inclusion of multidimensional stakeholders. This growing complexity in product design has left design teams unequipped, as classical design theory is bounded by designer experience, expertise, and cognition. One novel approach to tackling product complexity is...
Using repositories to store product design information can provide additional and extensive design knowledge to the global design community. Using repository data in the design of new products can be especially impactful for DfX design objectives, such as product sustainability, about which many engineering designers have limited knowledge. Furthermore, repositories...
T cells are one of the key cells in the immune system. Although they are not the first line of defense against a pathogen, their functions can greatly enhance the phagocytosis and destruction of pathogens as well as the development of antibody responses. Furthermore, even when responding T cells have...
Shifting the Scholarly Conversation: A Rhetorical Reading of Peter Elbow's Work explores Peter Elbow's contributions to the field of writing and rhetoric. Over the course of his long career, Elbow’s scholarly and pedagogical work has been much praised and much criticized. Elbow's work has influenced generations of teachers and writers,...
Coastal flooding and erosion are major concerns for low lying coastal communities -- particularly in light of accelerated sea level rise and climate change. To improve quantitative understanding of the physical drivers of both flooding and coastal landscape change, this dissertation explores coastal morphodynamics bridging the land-sea interface on modally...
The fuzzy front end of engineering design can present a difficult challenge, and as such, recent engineering design research has focused on guiding and influencing the way a designer ideates. Early ideation can be especially difficult when attempting to integrate specific design objectives in product design, called Design for X...
Although IL-4 is a well-characterized multi-functional cytokine, its role as a survival factor in T cells is not completely understood. In an attempt to uncover IL-4-mediated survival, we studied caspase activation in primary mouse T lymphocytes undergoing death by neglect, activation-induced or steroid-induced cell death. Here, we identify the executioner...
Pre-existing Expressed Sequence Tag (EST) libraries (1,305 sequences) and a newly constructed microsatellite-enriched genomic library (136 clones) from the V. corymbosum cultivar 'Bluecrop' were screened for unique Simple Sequence Repeat (SSR)-containing sequences. Our goal was to develop a set of robust SSR markers for use in managing the National Clonal...
Native to the Pacific Northwest, Ceratomyxashastais a myxosporeanparasite that infects wild and cultivated salmon and has a significance impact on its population in the Klamath River basin. The study suggests that the transmission of mixed genotypes of the parasite are common in Chinook salmon but the age of the fish...
Full Text:
, Ceratomyxa shasta
Transmission and
Persistence of
Ceratomyxa shasta in
Chinook Salmon
P E T E R WO N G
Sediment transport in a gravel-bottomed stream located in the Oregon Coast Range was studied to determine the effects of a single
layer of large particles (the armour layer) located at the surface of the bed material. The bed load transport system was studied jointly with suspended sediment transport to understand...
The topic of statistical mechanics has been studied for over a century, and it is one of the pillars of modern physics. This theory can be applied to the study of the thermodynamic behavior of large systems of interacting particles, in which case it is referred to as equilibrium statistical...
Complementary methods of strain identification were sought to
delineate the composition of the population of Rhizobium trifolii
found in nodules of Trifolium subterraneum L. when exposed to an
Abiqua silty clay loam (Cumulic Ultic Haploxeroll) containing a
resident population of R. trifolii. Sodium dodecyl sulfate
polyacrylamide gel electrophoresis (SDSPAGE) was...
Proper immune function is indispensable, as failure to mount an immune response against a pathogen can lead to serious complications or even death. T cells act by enhancing the activation of phagocytic cells as well as the activation of B cells. Their widespread influence on an immune response makes optimal...
The spectrophotometric titration of the tyrosine residues,
their reaction with N-acetylimidazole, and the effect of pH on the
thermally induced conformational transition of ribonuclease T₁ have
been investigated. The results of spectrophotometric titration in
0.20 M KCl/0.001 M sodium phosphate suggest that titration of the
tyrosine residues occurs in two...
Ten T-mycoplasma strains isolated from the urine of male
students with nongonococcal urethritis were compared in immunodiffusion,
indirect hemagglutination (IHA), metabolic inhibition (MI),
and immunoelectrophoretic tests using antigens prepared from these
isolates and specific rabbit antisera. Immunodiffusion, MI, and IHA
tests revealed complex antigenic interrelationships among the
T-mycoplasmas, whereas immunoelectrophoretic...
A study of the relative rates of the alkyl hydrogen abstraction
from a series of meta and para substituted t-butylbenzenes by the
chlorine atom at 70°C has been carried out. Application of the
Hammett equation yielded a ρ value of -0.44 for the para compounds.
Possible explanations for the non-linearity...
This thesis traces the relationship between the First World War, constructions of masculinity, and the life and poetry of T.S. Eliot. Central to this relationship is a study of homoeroticism, which the author characterizes as different from homosexuality but not exclusive of it, in late 19th and early 20th century...
We are witness to an ever tighter coupling between natural hazard-related disasters ("disasters") and violent social conflict ("conflict"). Previous research has established that disaster has the propensity to lead to conflict, and conflict, in turn, has been found to contribute to disaster vulnerabilities. The field of disaster diplomacy, by contrast,...
Nitrification is a critical step in the global nitrogen cycle involving the biological oxidation of ammonia (NH₃) to nitrite (NO₂⁻ ) and then to nitrate (NO₃⁻). The first step in nitrification is carried out by NH₃-oxidizing bacteria (AOB) and archaea (AOA), and the second by NO₂⁻-oxidizing bacteria (NOB). In addition...
An evaluation was made on the nutritive value of tropical forages
and by-product feeds for rabbit production. Digestibility of nutrient
fractions, feed preferences, growth, combination of forages, supplementation
of micro and macro nutrients and/or effects of drying temperature
on the quality of four groups of forages, namely woody legumes
(WL),...
As societies we face many environmental issues that need to be addressed through sound management. Whether in the terrestrial or marine environment, effective management techniques from natural resource management (NRM) agencies must be used continually to address these issues. Law enforcement has been used as one approach and an extension...
Previous investigations of glacier dynamics at Tioga Pass during the Last Glacial Maximum (LGM) have produced different conclusions. A map of the LGM ice extent and flow direction (Alpha et al., 1987) illustrates a south-to-north direction of ice flow across the pass with little evidence to support this inference. Since...
The littoral zones of seven reservoirs in the southern Willamette Valley of Oregon were sampled with a boat electroshocker during the summer months of 1995 and 1996. Shoreline substrates were inventoried before sampling sites were randomly selected. Sampling sites consisted of 9 of 12 possible habitat types including four substrate...
Heavy metals, such as copper, zinc, and cadmium, are ubiquitous in stormwater and potentially toxic to aquatic organisms at low concentrations. Removal of heavy metals contamination by conventional treatment is expensive and does not always reduce metals concentrations low enough to ensure safety of all aquatic species. This research seeks...
Best international health practice requires that all people benefit equally from health care
services regardless of their socio-economic status and that healthcare payments be based
on ability to pay. Although recent household surveys in Malawi show progress in a
number of health indicators population averages, many inequalities in health outcomes...
I compared hand sampling, two-pass multiple removal sampling, mark-recapture and catchability-based population estimates for the Pacific giant salamander (Dicamptodon tenebrosus) at 22 sites in 11 streams of Cascade Mountains of Oregon. Mark-recapture and catchability-based population estimates were not significantly different (p 0.86). Hand sampling and two-pass multiple removal population estimates...
The effects of roadbuilding, logging and burning upon stream
runoff responses to individual storms are evaluated for the Alsea
experimental watersheds, located in the Oregon Coast Range, The
parameters analyzed are peak discharge, induced peak discharge,
time-to-peak, and storm-runoff volume. The volume parameter is
further sub-divided into total, quick, delayed,...
Mixed linear models are a time honored method of analyzing correlated data. However, there is still no method of calculating exact confidence intervals or p-values for an arbitrary parameter in any mixed linear model. Instead, researchers must use either specialized approximate and exact tests that have been developed for particular...
A stalagmite (sample OCNM8-02A) collected from Oregon Caves National Monument (OCNM) was sampled for stable isotope ratios in order to develop a record of Pacific Northwest climate history. Nine U-series dates indicate that the record spans the time period - 13.5 - 9.5 ka. The stalagmite growth rate varied from...
An inelastic scattering experiment was done in which 17-MeV
protons from the Oregon State University cyclotron were scattered
from ¹⁴N
and ¹⁵N gas targets. Angular distributions are shown for
the ground, 6.32-, 7.56-, 8.31-, and 8.57 -MeV states and the 5.3- and
7.2-MeV unresolved doublets of ¹⁵N, and for the...
Understanding sandbar dynamics and variability is integral to developing a predictive
capacity for nearshore flows, sediment transport, morphological change, and
ultimately for determining coastline exposure to damaging storm waves. Along the
high-energy U.S. Pacific Northwest (PNW) coast, sandbars typically dominate the
bathymetry of the active zone. Here we report on...
:
_____________________________________________________________________
Peter Ruggiero
Understanding sandbar dynamics and variability is integral to developing
This dissertation presents results from three studies that address major scientific questions in glacial geology and paleoclimatology for the late Pleistocene and Holocene using relatively new geochemical and statistical techniques. Each of the studies attempts to answer a longstanding question in the respective field using geochemical or statistical methods that...
The results presented in this dissertation address a number of questions regarding late Pleistocene and Holocene ice-sheet and climate interactions, spanning disciplines involving paleoclimatology and atmospheric science. These studies use various techniques in geochemistry, climate modeling, and ice-sheet modeling to address ice- sheet response to climate and the attendant interactions...
This dissertation explores one overarching question relevant to the
paleoclimate of the latest Pleistocene glacial cycle (approximately the last
130,000 years): “How did spatial and temporal evolution of ocean
temperature, both at the surface and interior, relate to other parts of the
climate system in the late Pleistocene?” Results from...
Oregon’s foredunes are part of a dynamic coastal environment that constantly evolves in response to both ecological and physical forces. Invasive beachgrasses have outcompeted native dune grass in the region and have influenced the shape of Oregon’s foredunes via species-specific biophysical feedback mechanisms. As climate change induced sea-level rise will...
Coastal hazards are the result of numerous physical processes cumulatively causing water levels to flood and erode the land. The waves, storm surges, tides, and run-off contributing to elevated water levels are each the product of chaotic and random weather patterns. These stochastic weather patterns dissipate energy in Earth's climate...
Research strongly suggests non-articulation is an effective indication of the reporting quality of both the cash flow statement (Gong et al. 2014) and income statement (Collins et al. 2015). I complete the financial reporting circle by examining the association between non-articulation and the reporting quality of the balance sheet, captured...
:
________________________________________________________________________
Peter J. Frischmann
Research strongly suggests non-articulation is an effective
Coastal and estuarine flooding and erosion events are usually driven by the cumulative effect of multiple individual processes like waves, streamflow, storm surge, and/or tides. This dissertation focuses on separating the influence of the regional and local-scale geomorphologic and hydrodynamic processes driving variability in the magnitude and impacts of extreme...
The metal-organic–framework MOF-5 is used as an adsorbent in advanced systems for vehicular hydrogen storage that are currently under development. Presently, these systems are limited by poor thermal conductivity of the adsorption bed, and thus our research addresses how the interfaces between grains of MOF-5 can be engineered to improve...
The cinnabar moth (Tyria jacobaeae (L.), Lepidoptera: Arctiidae) is an icon in
population ecology and biological control that has recently lost its shine based on evidence
that (1) it is less effective than alternatives (such as the ragwort flea beetle Longitarsus
jacobaeae (Waterhouse) (Coleoptera: Chrysomelidae) for controlling ragwort Senecio
jacobaea...
This dissertation presents the results of three studies that assessed climate variability on short and long timescales in western United States. The growth of carbonate formations in caves (speleothems) is used to infer the timing and amplitude of past climate variability. We first assess the controls on speleothem growth for...
:
_____________________________________________________________________
Peter U. Clark
This dissertation presents the results of three studies that assessed
The coast of Oregon is highly dynamic, with beach and dune morphodynamics constantly evolving in response to physical and ecological forcing at scales ranging from seconds to decades and meters to tens of kilometers. Evaluating spatial and temporal trends in shoreline evolution is paramount in understanding and eventually developing a...
Coastal communities throughout the US West Coast and elsewhere are facing the daunting task of preparing for climate change impacts, particularly the hazards from increased flooding and erosion. With sea-level rise, changing storminess patterns, and possible changes to the frequency and severity of major El Niño events, communities are already...
Coastal dunes provide a diverse set of ecosystem services including coastal protection against destructive surge and waves during storm events. Dunes are constantly evolving through various stages of response to storm events and post-storm recovery at rates that vary due to a range of drivers including pre-existing morphology, environmental forcing...
This study utilizes probabilistic surrogate modeling techniques around San Diego Bay with an emphasis on naval infrastructure and operations to evaluate the impact of five global mean sea level rise scenarios (GMSLR). Spatially continuous total water levels (TWLs) are combined with a digital elevation model (DEM) of the region to...
This thesis presents the results of an investigation into the interactions between the present-day South Cascade Glacier and the former Mauna Kea ice cap at short (annual to centennial) and long (millennial and multimillennial) time scales. To quantify the response of South Cascade Glacier to atmospheric conditions, a surface energy...
Recent coastal disasters (e.g., Hurricane Sandy, Typhoon Haiyan) and chronic issues (e.g., Florida's "nuisance flooding") provide numerous examples of coastal communities struggling to adapt in the face of climate change impacts. Decision-makers and the public alike must reconcile the lack of "fit" between a rapidly changing environment and the effects...
This thesis presents the results of an investigation into the measured and modeled
mass balance of the Collier Glacier, a small (0.70 km²), valley glacier located in the
Oregon Cascade Range (44° 10' N, 121° 47' W). Here we present mass-balance
measurements conducted for the 2009 and 2010 balance years...
Documented trends in rising sea levels, storminess, and extreme wave heights have the potential to increase the frequency and magnitude of coastal change hazards, increasing risks to coastal infrastructure and environmental resources. Coastal planners and decision makers need information about the impacts of future hazards in order to apply mitigation...
:
________________________________________________________________________
Peter Ruggiero
Documented trends in rising sea levels, storminess, and extreme wave
Soil organic carbon (SOC, kg C m-2) is an important component in evaluating global C stores. The nitrogen (TN, kg N m"2) cycle is closely linked to C and understanding its role is also important. Contents and distributions of SOC and TN in soil profiles, to 1-meter depth, were estimated...
Hazards threaten coastal communities and ecosystems over a wide range of spatiotemporal scales. One of the most pressing concerns for coastal property owners, decision makers, and researchers is the uncertain role that a changing climate will have on the intensity and frequency of these hazards. The significant uncertainties associated with...
:
_____________________________________________________________________
Peter Ruggiero
Hazards threaten coastal communities and ecosystems over a wide range of
This paper covers the impact of Franklin D Roosevelt's, "Indian New Deal"
and the effect it had on federally recognized Indian tribes. I have taken an
in-depth look at specific areas of New Deal legislation including the Indian
Reorganization Act, the Johnson O'Malley Act, and the Indian Arts and
Crafts...
The principles of justice developed by John Rawls and
articulated in his work A Theory of Justice, published in 1971, were
used as the evaluative tool in assessing health care distribution in
the United States. A model for using Rawls' theory was developed
emphasizing the role of the 'least advantaged'...
The understanding and prediction how coastal wetland vegetation attenuates wave action has received renewed attention with global climate change impacts and increasing populations on coastlines. Conventional attenuation models utilize empirical drag coefficients, but these coefficients exhibit a wide range of values, and there is some uncertainty in the relative importance...
The search for the stand density that optimizes growth and hence generates the maximum amount of wood is one of the philosopher’s stone in modern forestry. Since scientific methods were applied to forestry, numerous generations of foresters have studied the relations between stocking density and growth, obtaining diverse results and...
A perfectly matched layer (PML) is widely used to model many different types of wave propagation in different media. It has been found that a PML is often very effective and also easy to set, but still many questions remain.
We introduce a new formulation from regularizing the classical Un-Split...
In this paper, an analysis of the clock-feedthrough effects in
switched-current (SI)' circuits will be presented. The clock-feedthrough
effects caused by the non-ideal characteristic of MOS
switches when they are turned off limit the accuracy of the analog
track-and-hold (T/H) circuits. A model to analyze and characterize this
effect is...
Land use alters the physical and biological structure of stream ecosystems and potentially alters their capacity to process nitrogen (N), an essential nutrient that has nearly doubled in abundance on the biosphere
during the past century from human activities. In this dissertation, I quantified uptake and transformation of nitrate (NO₃⁻)...
Ambiguity is a typical element of treaty documents. Its success in accommodating divergent interests, creating boundary conditions leading to dispute prevention and facilitating the conclusion of agreements has been widely recognized, yet less is known whether or not intentional ambiguity or unintentional ambiguity, or perhaps both, lead to challenges or...
The principal salinity extrema and extremum surfaces of the
world ocean are described by the analysis and plotting of data from
885 hydrographic stations in the three major oceans, the Southern
Ocean, and the American Mediterranean Sea. The distributions of
salinity, temperature, depth, and density along the extremum surfaces,
plotted...
Although much has been learned about the comparative
nodulating behavior of simple mixtures of rhizobial strains
under non-soil situations, it is unclear how these findings
relate to the factors influencing nodulation success by the
complex mixtures of strains found within soil-borne
rhizobial populations. Information on the structure and
physiological behavior...
A study consisting of three parts was undertaken to investigate how variation in species interactions, population genetic structure, epidemiological parameters, and plant breeding system may influence the ecology and biological control of an apomictic invasive plant, Chondrilla juncea (Asteraceae). Interactions between natural enemy species may modify their net effect on...
In this dissertation the interactions between hydrodynamics, sediment suspension and transport, and morphological evolution in the surf zone was investigated with a large-scale laboratory experiment data, CROss-Shore Sediment Transport Experiment (CROSSTEX). The data set included comprehensive measurements of water surface elevation, fluid velocity, sediment concentration, and morphology for irregular waves...
Non-target effects are one of the greatest potential risks of weed biological control programs, and understanding non-target effects of biological control at the population level is crucial for predicting when they will occur and altering the perception of biological control as a whole. In this thesis, we assessed the ecological...
: _______________________________________________________
Peter B. McEvoy
Non-target effects are one of the greatest potential risks of weed biological
Wheat varieties of differential tolerance to Al were used in a
series of nutrient solution experiments to study the inhibitory effects
of Al on growth and nutrient uptake. The pH and the Al and P concentrations
were rigorously maintained to prevent the confounding
effects of Al and P precipitation and...
Maximum equilibrium scour depths, equilibrium scour volumes,
and induced equilibrium movements at isolated obstacles on river
beds were investigated in clear-water scour. The research was
achieved by a systematic flume study based on the results of
dimensional analysis of local scour.
The main tested obstacles for local scour were cubes....
In this thesis I argue that Cormac McCarthy's 1985 novel Blood Meridian serves as a critique of the American Western mythos by collapsing aspects of myth, ideology, and the sublime into the question of violence's relationship to language. In explicating the novel, I demonstrate how the ironies staged between the...
In recent years considerable interest has been shown in the diversity of ammonia-oxidizing bacteria in soil communities. The majority of the research has been carried out in Northern Europe where soils have received high atmospheric inputs of nitrogen over the past two centuries. In contrast, although much work has been...
The objectives of this thesis were to evaluate the responses of soil microbial communities to physical and chemical disturbances, and associate these responses with soil functional stability and changes in soil quality. The first study consisted of application of heat shocks (HS) to soils with contrasting land use history to...
I used field experiments to study how plants in two grassland communities colonized
soil mounds made by the Camas pocket gopher, Thomomys bulbivorus (Richardson). I
identified potential mound colonizers in each source of colonization (buried propagule bank,
seed rain, and established vegetation) and then measured species specific rates of
colonization...
The objective of this study is to assess the quantitative
genetic structure of fitness characters in Tribolium confusum
flour beetles. Estimates of genetic variation and covariation for a
series of fitness components (two measurements of survival,
larval weight, development time, fecundity, and female
productivity) were obtained from two populations of...
Ectomycorrhizal (ECM) fungi of the genera Piloderma and Ramaria form dense hyphal mats in the organic and upper mineral soil layers, respectively, in coniferous forest floors of the Pacific Northwest. Previous studies have determined that fungal mats change the chemical, physical, and biological properties of the soil within. Little information...
:
_____________________________________________________________________
Peter J. Bottomley
Ectomycorrhizal (ECM) fungi of the genera Piloderma and Ramaria form
Fish diseases and various parameters associated with disease
caused mortality of fish were monitored at the Oregon State University
Marine Science Center and at a private mariculture facility on
Yaquina Bay during a period of five years. Nearly all disease problems
observed were caused by Vibrio anguillarum and Vibrio spp....
The optical Bloch equations for a two-level atom in a laser
beam with an amplitude of arbitrary time dependence are derived in
the rotating wave approximation. The light scattered by the atom
is investigated for the special case of an intense, resonant laser
beam with a sinusoidally modulated amplitude. The...
Frequency distributions are calculated for the optical
decay of two atomic states which are coupled by a strong,
linear rf field. Both the rotating and the counter-rotating
components of the field are maintained throughout the
calculations. For strong fields many peaks are present in
the frequency spectrum and are explained...