Increasingly diverse interests in commercial and recreational use of marine resources are creating new challenges for coastal ocean management. One concern of increased offshore use and development off the Oregon coast is the potential impact on marine bird populations. We summarized the primary surveys of seabird breeding colonies and at-sea...
Tourism is an ever-growing economic force across the world, the United States, Oregon, and on the Oregon Coast. In Oregon alone, the tourism industry had an economic impact in the state of $7.9 billion in 2006, up from $6.9 billion in 2004 (OTC, 2007). Though economically beneficial, tourism can be...
Stabilization of the Yaquina Bay shoreline along the northeastern edge of the Hatfield Marine Science Center (HMSC) campus became necessary to halt erosion that threatened both HMSC critical infrastructure (seawater storage tank) and public access to the HMSC Nature Trail. A Dynamic Revetment (gravel beach) was installed in November, 2011...
Using bulked segregant analysis, five RAPD markers were identified that were
linked in coupling to a gene conferring complete resistance to eastern filbert blight caused
by Anisogramma anomala (Peck) E. Muller in hazelnut (Corylus avellana L.). Two
modified backcross populations were inoculated and scored for resistance to the pathogen
and...
Zoos and aquariums are among the best informal education avenues for individuals to further develop conservation beliefs and values. Research documented the presence of conservation messages at aquariums, that visitors expect such messages, and staff and volunteers at conservation organizations increase their conservation-related knowledge and behaviors. This research often focuses...
Science is one of the fundamental building blocks of modern societies, and though some science topics are easily accepted by public audiences, others generate intense social controversy by challenging beliefs that are fundamental to a person’s, or group’s, identity. The Theory of Evolution is one of these “hot-button” issues, as...
In this study I discuss the state of Free-Choice Learning research, and an investigation into the use of personal ubiquitous technology on visitors' experiences at a science center. The three manuscripts included in this document:
1. Review published research on free-choice learning from 1997-2007 from selected journals
2. Examine visitors'...
Microplastics, plastic marine debris less than 5 mm in size, is a threat to the health of our oceans. One important way to reduce microplastics in our oceans is to educate people about the issue, particularly future decision-makers. In this study, a middle school curriculum was developed using current scientific...
The environmental movement needs people from communities of color and the differing perspectives they provide. Latinas/os are one of the largest communities of color in the US, and their numbers continue to grow. However, mainstream environmental organizations have failed to engage this community in authentic ways. The lack of meaningful...
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Shawn Rowe
Abstract
The environmental movement needs people from communities of color and
European hazelnut, an important nut crop in Oregon agriculture, is threatened by the fungal disease eastern filbert blight (EFB) caused by Anisogramma anomala (Peck) E. Müller. The hazelnut breeding program at OSU has been working on development of EFB-resistant cultivars. DNA markers allow mapping of traits using segregating progenies and...
With over 175 million Americans visiting each year and the ability to create unique learning experiences, informal science institutions may play a greater role in climate change education in the coming years. As facilities in Oregon begin to incorporate climate science and solutions into their educational programming, effective communication across...
Due to the overwhelming concern for the current state of our oceans, The Pew Ocean Commission (2003) and the U.S. Commission on Ocean policy (2004), have both strongly recommended an increase in our society’s ocean literacy. An increase in ocean literacy can be achieved through informal education institutions such as...
The Cooperative Institute for Oceanographic Satellite Studies
(CIOSS) partners with The Science and Math Investigative Learning
Experiences (SMILE) Program to bring ocean sciences and satellite
oceanography to high school students and teachers around the
state of Oregon. This study was conducted as a formative program
assessment during the third year...
As climate change and its associated environmental and socioeconomic impacts become increasingly severe and imminent across the United States, it has become imperative for the public to be aware of and actively engaged with this issue. Although scientists generally perceive outreach in a positive light, a critical barrier that tends...
Learning is lifelong, life-wide and life-deep, meaning it happens anywhere, at any time (Banks, et al., 2007). The implications of learning with intent, is where “free choice learning” began (Falk and Dierking, 2002; 2010). Families play a vital role in developing an integrated curriculum including: rural anthropology (epigenetics, tribalism), Geosciences...
Eastern filbert blight (EFB), caused by Anisogramma anomala (Peck) E.
Miiller, is a devastating disease to orchards of the European hazelnut (Corylus
avellana L.) in the Willamette Valley, Oregon. Host resistance is the most
desirable means of disease control. Fifty-eight hazelnut accessions, including
European cultivars and interspecific hybrids were evaluated...
High resolution images of a dim companion in a binary star system can be obtained using a Digital Micromirror Array (DMA) as an optical mask. Imaging can be problematic because the intense light from the main star can saturate the detector and leave the companion unnoticed. Placement of the DMA...
Full Text:
Mask in Optical Astronomy
Shawn Gilliam
Department of Physics
301 Weniger Hall
Oregon
The Hatfield Marine Science Center (HMSC) is an interagency campus in Newport, Oregon with
a mission of research, education and outreach in marine sciences through collaborative
partnerships. Located on a 49 acre site on Yaquina Bay, Oregon, it is adjacent to diverse
habitats, many of which are subject to action...
Within the Pacific Northwest, USA, root diseases of conifers are a major forest health concern. These diseases are primarily caused by basidiomycete fungi. These fungal associates play a vital role in carbon sequestration but also have a significant negative economic impact within the timber industry. As a result, research on...
Aqueous hydroxo Hf nanoclusters enable studies to identify and codify steps in the deposition of Hf-based oxide thin films from solution precursors. HfOCl2 reacts with combinations of H2O2(aq), acids, and TMAH to produce polymetal species at high pH and low pH. X-ray scattering and spectroscopic methods reveal the nature of...
The most important part of parallel computation is communication. Except in the most embarassingly parallel examples, processors cannot work cooperatively to solve a problem unless they can communicate. One way to solve the problem of communication is to use an interconnection network. Processors are located at nodes of the network,...
The chemolithoautotrophic nitrite oxidizing bacteria (NOB) participate in the
biogeochemical cycling of nitrogen by catalyzing and conserving energy from the
oxidation of nitrite (NO₂-) to nitrate (NO₃-) via a nitrite oxidoreductase (NXR). The
main objective of this work was to comparatively annotate and analyze the genome
sequences of Nitrobacter winogradskyi...
The three dimensional structure of both a ligand and its cognate receptor are required for the success of structure-assisted drug design. This thesis reports the crystal structure of hectochlorin, a small, bioactive molecule, and the steps toward determining the crystal structure of an RNA molecule that is an attractive target...
The purpose of this study was to determine the concerns of past participants of the Summer Agriculture Institute regarding the use of agriculture as a context for teaching and to determine how they implement curriculum integration. The study used the Concerns-Based Adoption Model as a theoretical framework, which resulted in...
As the forest industry moves toward the use of younger trees and production of an increasing number of composite products improving durability has gained importance. Coatings are one of the most widely used methods for improving wood durability because they improve resistance to water penetration, and subsequent shrinking and swelling,...
Variation in cheese quality due to geographic location is important to cheese producers, consumers, and retailers on a global level. Understanding the impacts of geographic location of cheese plants may be useful to businesses for marketing, cost reduction, and quality improvement. Many aspects of variation due to geography have been...
Mycobacteriosis is a common disease of laboratory zebrafish (Danio rerio). Different infection patterns occur in zebrafish depending on mycobacterial species. Mycobacterium marinum and M. haemophilum produce virulent infections associated with high mortality, whereas M. chelonae is more wide spread and not associated with high mortality. Identification of mycobacterial infections to...
The european hazelnut (Corylus avellana L.) is native 24 to most of Europe and nearby
areas in Asia Minor and the Caucasus Mountains. Cross-pollination is enforced by sporophytic
incompatibility under the control of a single locus with multiple alleles (haplotypes).
Fluorescence microscopy is routinely used to determine if a pollination...
The purpose of this study was to compare the muscular
strength and endurance of thirty-two men 51 to 79 years of age who
engage in weight training (WT), aerobic training (AT), cross training
(CT), or no training (S). The design employed in the study was a 2x2
between subjects factorial...
European hazelnut, Corylus avellana L., is the only economically important nut crop
in the family Betulaceae. One of the threats to the hazelnut industry in the Pacific
Northwest is the fungal disease eastern filbert blight (EFB) caused by the
pyrenomycete Anisogramma anomala. Host genetic resistance to EFB identified in the...
Inheritance of eight enzyme systems, alanine aminopeptidase (AAP), aspartate
aminotransferase (AAT), aconitase (ACON), glucose phosphate isomerase (GPI),
malate dehydrogenase (MDH), 6-phosphogluconate dehydrogenase (6-PGD),
phosphoglucomutase (PGM), and shikimate dehydrogenase (SDH) was studied in
hazelnut (Corylus avellana L.) by either polyacrylamide gel electrophoresis
(PAGE) or starch gel electrophoresis. Three isozymes were detected...
Given the current state of our oceans, the Pew Oceans Commission (1993) has strongly recommended that increased efforts be made towards ocean literacy. Informal education and outreach programs like the Whale Watching Spoken Here program are important contributors to life-long learning. However, there is little research looking at how these...
Anthesis of both staminate and pistillate flowers of Corylus occurs in midwinter. To insure adequate pollination and nut set, these flowers must attain a sufficient hardiness level to withstand low temperatures. This study estimated cold hardiness of Corylus cultivars and species using laboratory freezing of shoots without artificial hardening. In...
To identify novel host genetic resistance to eastern filbert blight, caused by the fungus Anisogramma anomala (Peck) E. Muller, ninety European hazelnut {Corylus avellana L.) varieties and interspecific hybrids (with C. americana Marsh, or C. colurna L.) were screened for response to the eastern filbert blight pathogen after inoculation in...
European hazelnut (Corylus avellana L.) is a diploid with 11 pairs of chromosomes (2n = 2x = 22), monoecious, dichogamous and wind-pollinated. Eastern filbert blight (EFB) caused by Anisogramma anomala is a serious disease of European hazelnut (Corylus avellana) in North America, and infection leads to cankers that girdle branches...
Eastern filbert blight, caused by Anisogramma anomala (Peck) E. Muller,
is a serious threat to hazelnut (Corylus avellana L.) production. Resistant
cultivars offer the best control. Screening systems were needed to reliably
identify disease, particularly in immune progeny derived from 'Gasaway'. An
indirect enzyme-linked immunosorbant assay (ELISA) was developed using...
Heritability in the narrow sense and in the broad sense, variance components and
correlation coefficients are important genetic parameters in a breeding program. The
estimates of these parameters can provide important information for a breeder in the
selection of parents, the most efficient design for evaluation of seedlings and advanced...
Twenty-one pairs of simple sequence repeat (SSR) primers were used to
investigate genetic diversity in 270 accessions of European hazelnut (Corylus avellana)
representing a wide geographic range. A capillary electrophoresis system and ABI
Genescan® and Genotyper® software were used to determine the allele size generated
from each PCR reaction based...
New highly polymorphic simple sequence repeat (SSR) markers for European hazelnut (Corylus avellana L.). were developed from several sources. The markers were characterized, and segregation in a mapping population allowed to assign them to linkage groups. Their transferability across genera and species in the Betulaceae family was investigated. SSR markers...
Museums, aquariums, and technology centers are informal learning environments that facilitate the understanding of scientific phenomena while supporting self-motivated learning. Families are a social group that frequently visits these sites. There are multiple opportunities for adults and children to engage in independent sense-making and collective discussion about their experiences with...
The hundred-year history of the hazelnut industry in the Pacific Northwest is threatened by eastern filbert blight (EFB) caused by the fungus Anisogramma anomala (Peck) E. Müller. Marker-assisted selection (MAS) has been extensively used for ‘Gasaway’ resistance in the hazelnut breeding program at Oregon State University. Concern over breakdown of...
The European hazelnut (Corylus avellana L.) is a diploid (2n = 2x = 22) tree crop important to the economy of Oregon’s Willamette Valley, where 99% of hazelnut production in the United States is located. Corylus avellana exhibits sporophytic self-incompatibility (SSI), controlled by a single S-locus with at least 33...
European hazelnut is a significant crop in the Pacific Northwest, and the US ranks
4th internationally for hazelnut production. Production in the Pacific Northwest is
threatened, however, by the disease eastern filbert blight (EFB) caused by the fungus
Anisogramma anomala (Peck) E. Müller. To meet the challenges faced by the...
With 150 million people visiting accredited zoos and aquariums annually, these institutions have the unique opportunity to present conservation-oriented messages to a large and receptive audience. The purpose of this study was to explore the role of interpretation and/or the viewing of live animals in the communication of these messages....
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Shawn M. Rowe
With 150 million people visiting accredited zoos and aquariums annually
Data visualizations designed for academic scientists are not immediately meaningful to everyday scientists. Communicating between a specialized, expert audience and a general, novice public is non-trivial; it requires careful translation. However, more widely available visualization technologies and platforms, including new three-dimensional spherical display systems in schools and informal science education...
This study reports on the creation and testing of a model concept-mapping process that will aid the development and documentation of ocean science educational content of The Science and Math Investigative Learning Experiences (SMILE) Program, a pre-college science and math enrichment program based at Oregon State University. The project uses...
Museum settings including aquariums, zoos and science centers rely heavily on their volunteer docent populations to interact with and communicate science and conservation concepts to the visiting public. The interactions docents have with museum visitors are important to meeting the educational expectations of museums and improving public science literacy as...
European Hazelnut (Corylus avellana L.) is an important crop in the Pacific Northwest where around 5% of the world's hazelnuts are produced. Hazelnut production in the Pacific Northwest is threatened by eastern filbert blight (EFB) caused by the pyrenomycete Anisogramma anomala. Host resistance is a useful strategy to control disease,...
In the absence of meaningful federal climate policy in the United States, states and local governments are poised to make a substantial contribution to decarbonization efforts. At present, over 70 local jurisdictions and two states have enacted building electrification policies that limit the use of natural gas in buildings and...
From the genome sequence of hazelnut (Corylus avellana), 192 new polymorphic simple sequence repeat (SSR) markers were developed, characterized, and used to investigate genetic diversity in 50 accessions. Next-generation sequencing allows inexpensive sequencing of plant genomes and transcriptomes, and efficient development of polymorphic SSR markers, also known as microsatellite markers,...
In recent years, zoos and aquariums have become prominent centers for environmental education and have focused much of their organizational efforts towards conservation and inspiring conservation action among visitors. However, there is little research available to support the efficacy of these efforts, especially in relation to the behavioral outcomes associated...
Funding agencies, specifically the National Science Foundation (NSF), are placing particular emphasis on the societal relevance and broader applications of scientific research, otherwise known as Broader Impacts (BIs). Scientists are required to address the BIs merit review criterion in their research proposals or they will not get funded. However, many...
Ocean observing groups are currently making efforts to work with well-defined end-user groups, like boaters and fishermen, to provide meaningful and effective real-time data (RTD) products and visualizations. However, providing meaningful data products for undefined groups such as the general public is not straightforward. In Oregon, several industry, science, and...
Grape powdery mildew (GPM, causal agent Erysiphe necator) is the most economically important disease of grapevine in the Western U.S. Low levels of GPM infection on clusters (1-5%) can negatively affect wine sensory quality, so intensive fungicide programs are common. This may lead to problems like excessive fungicide use and...
We simulate three-dimensional ice temperature fields to examine spatial-temporal history of the subglacial thermal environment during the last glacial cycle. Model results suggest that 60–80% of the Laurentide Ice Sheet was cold-based (frozen to the bed) at the LGM, and therefore unable to undergo large-scale basal flow. The fraction of...
Background: Transcriptome sequencing and assembly represent a great resource for the study of non-model species, and many metrics have been used to evaluate and compare these assemblies. Unfortunately, it is still unclear which of these metrics accurately reflect assembly quality.
Results: We simulated sequencing transcripts of Drosophila melanogaster. By assembling...
Phytophthora root rot decreases availability and quality of rhododendrons produced in the USA. Symptoms of Phytophthora root rot include root necrosis, leaf chlorosis, stunting, and permanent wilt. The purpose of this thesis was to better understand the impact of root damage, soil moisture, nitrogen fertilizer application, and pathogen species on...
The majority of research in environmental education (EE) has focused on measuring knowledge, attitudes, and behavior using quantitative tools and methods. Few studies have attempted to elicit and characterize children's conceptions of the environment or nature, particularly those resulting from a residential EE experience, which contextualize knowledge, attitudes, and may...
Introduction: In the US, irritable bowel syndrome (IBS) affects 1 in 10 people. IBS is a chronic functional gastrointestinal disorder that consists of many gastrointestinal symptoms such as abdominal pain, changes in bowel movement, differences in the appearance of stool, diarrhea, constipation, increased gas, and mucus in stool. IBS causes...
The relationship between physicians and patients is undeniably unique. To understand the qualities of a healing relationship, it is essential to analyze the perceptions that influence physician behavior. Metaphors and relationship models are often used in bioethics to analyze the construction of perceptions. The goal of this study is to...
Access to broadband internet is vital for rural communities in the digital age, but persistent barriers impact adoption and availability. This topic is analyzed through the lens of the Community Capital Framework (Emery & Flora, 2006). By surveying county commissioners, the research aims to better understand rural broadband challenges and...
Oregon is currently in the process of establishing Marine Reserves (MRs) and Marine Protected Areas (MPAs) within Oregon’s Territorial Sea. To assure that residents are aware of impending policy and the science behind it, science educators must formulate education tools that define terms and identify issues, but do not alienate...
The relationship between the level of Phaeocryptopus gaeumannii (Rohde) Petrak colonization and severity of Swiss needle cast (SNC) symptoms, the possibility of early testing of Douglas-fir (Pseudotsuga menziesii var. menziesii [Mirb.] Franco) for SNC tolerance, and geographic variation in coastal Oregon with respect to SNC tolerance were investigated. Comparisons between...
Bacterial blight (Xanthomonas arboricola pv. corylina) (Xac) of hazelnut (Corylus avellana L.) was described first in Oregon in 1915 and is now recognized as a damaging disease of young hazelnut trees worldwide. Stressed hazelnut trees in conditions such as planting on marginal sites, and trees between 1 and 4-years-old are...
Fibromyalgia syndrome (FMS) is recognized for its difficulty to diagnose and subjective symptomatology. There is no known cure nor a recommended therapeutic diet to aid in the multidisciplinary treatment for FMS. A systematic review was conducted to investigate if diets can improve the pain symptoms of fibromyalgia. A total of...
Sclerotinia sclerotiorum (Lib.) de Bary is a necrotrophic pathogen capable of causing white mold, a severe disease in common bean. White mold is of particular concern to the Oregon snap bean processing industry, where processors allow less than
3% incidence in harvested shipments. Breeding for white mold resistance in beans...
Outreach is a small, but significant component to modern research.
Developing an exhibit for public display can be an effective way to communicate science to broad audiences, although it may be a less familiar method to scientists than writing papers or giving presentations. I outline the process of developing an...
The US Department of Agriculture, Agricultural Research Service, National Clonal Germplasm Repository in Corvallis, Oregon, preserves more than 800 accessions of hazelnut (Corylus), including C. avellana cultivars and representatives of 10 other recognized shrub and tree species. Characterization and study of genetic diversity in this collection require cross-transferable markers, such...
Nitrobacter hamburgensis X14 is a facultative lithoautotroph that conserves energy from the
oxidation of nitrite (NO
2 ) and fixes carbon dioxide (CO2) as its sole source of carbon. The
availability of the N. hamburgensis X14 genome sequence initiated a re-examination of its
mixotrophic and organotrophic potential, as genes encoding...
Citizen science is a growing phenomenon across many branches of environmental science facilitating both increased science literacy and the collection of highly rigorous, longitudinal data. Understanding the motivations of adults to join and remain active in citizen science programs is important as the diversity and abundance of opportunities for public...
This paper discusses elementary, and secondary (K-12) teachers’ perceptions of cross-reality (XR) tools for data visualization and use of sensor data from the built environment in classroom curricula. Our objective was to explore the use of sensor-informed XR in the built environment and civil engineering (BECE) field to support K-12...
The water status of grape vine throughout the growing season is a primary determinant of vine vigor and berry composition. The concentrations of volatile compounds and precursors in grape berries are highly influenced by viticultural practices. Imposing a water deficit on the vine during berry development is an important vineyard...
The Augmented Reality Sandbox was developed by the UC Davis W. M. Keck Center for Active Visualization in the Earth Sciences (KeckCAVES, http://www.keckcaves.org), supported by the
National Science Foundation under Grant No. DRL 1114663.
Domesticated forms of wheat exhibit traits that have increased their adaptation
to cultivation by humans. Some of the most critical adaptive differences involve
changes to morphological features that make the crop easier to harvest like ear rachis
stiffness (brittle to non-brittle rachis) and the ease with which the seed is...
Ocean acidification (OA) is the result of increasing concentrations of anthropogenic carbon dioxide (CO₂) emissions, leading to a suite of alterations to specific parameters of ocean chemistry, which can negatively impact many marine organisms and ecosystems. Understanding how to measure and monitor the chemistry of OA will require specialized education...
The near physical environment is believed to be an integral component in creating quality learning and classroom environments for young children. Free-choice play periods during preschool daily curriculums are a widespread component of preschool early childhood education. Research has demonstrated that the presence of houseplants may be a contributor to...
Strawberry is one of four crops included in the USDA-NIFA Specialty Crop Research Initiative-funded RosBREED project along with apple, peach, and cherry. Phenotyping strawberry for specific horticultural and commercial traits is important to identify associations with genotypic marker(s). This process is the first step in translating genomic knowledge into enhanced...
It is often perceived that late maturity of grape gives a more complex aroma
profile to Pinot noir wine, however, there is little understanding of the basic flavor
chemistry of grape maturity on wine aroma. The aroma contributing compounds in
Pinot noir were first identified by aroma extract dilution analysis...
Water and climate change are interconnected with each other. Water is a medium through which the climate change manifests its far-reaching consequences on society. Sustainable water management practices are fundamental in implementing effective climate change adaptation. Given an influential position as global water actors, international water organizations (IWOs) play a...
The occurrence of seed-producing wheat x jointed goatgrass hybrids in infested wheat fields suggests the possibility of gene flow between the two species. This study investigates 'Madsen' wheat x jointed goatgrass F₁ and reciprocal backcross derivatives produced in experimental field plantings. Electrophoresis of the high molecular weight (HMW) glutenin seed...
The easy picking characteristic, expressed as low pod detachment force (PDF),
offers a way to decrease pod damage in bush green beans mechanically harvested for
processing and fresh market, and makes hand picking easier and faster. This study was
undertaken to examine inheritance in a cross of two green bean...
Nuclear DNA flow cytometry was used to differentiate ploidy level and determine nuclear DNA content in Rubus. Nuclei suspensions were prepared from leaf discs of young leaves following published protocols with modifications that included: increasing the stain concentration, adding the stain after the RN ase treatment instead of adding it...
Cuphea is an herbaceous genus having species whose seed
storage lipids are predominantly medium-chain triglycerides (MCTs).
Cuphea lanceolate Ait, and Cuphea viscosissima Jacq. are central to
the breeding of Cuphea as a new commercial source of MCTs. The
objectives of this thesis were to develop a reliable method to
extract...
Informal higher education science learning programs are increasingly being used as a tool to build scientific research capacity. However, there is low understanding of the impact that these programs on their target audiences, which is important to future capacity building efforts and program design. The purpose of this research project...
This dissertation examines learning driven adaptations in salmon recovery efforts and water resources management in Oregon. The case study utilizes a framework highlighting the connections between human and natural systems. Semi-structured interviews are used to analyze interactions between rural riparian landowners and watershed council staffs living and working in Oregon’s...