The Northern Rubber Boa (Charina bottae) is a small, secretive boa native to the Pacific Northwest. Despite this being possibly the highest latitude boas and one of only two boas native to the continental U.S., it has received surprisingly little attention. Most of the research on the natural history of...
Executive function (EF) is an extensively researched topic as a predictor for academic achievements for children. Delineated as qualities of self-regulation, EF prepares a child to produce successful behaviors for their learning and social environments. Entering school with sufficient self-regulation skills is proven advantageous for scholarly performance. Within the early...
The “why” of any situation is one of the most important questions to ask. Inventors have ideas every day. Some ideas are the brilliant ideas that lead to a better tomorrow. To protect these ideas, inventors turn to patents, a governmental grant of the right to stop others, for a...
The use of genetic algorithms to compose music and generate sounds is an area of interest in the artificial intelligence field. Music and instrument sounds have known rules and structures that can be followed which make them well-suited for genetic algorithms. However, genetic algorithms still struggle to generate sounds comparable...
This capstone study reports on global warming-induced changes to the Colorado subalpine zone climate and disturbance regimes. It assesses the impacts of these changes upon the dominant subalpine tree species and summarizes future species distribution modeling for these and other nearby species potentially suitable for the future subalpine zone in...
Cell signaling under external stimulation is a critical mechanism that governs many biological processes such as cell proliferation, cell migration, and cell apoptosis, etc. For multicellular organisms, the ability to synchronize heterogeneous individual cellular responses through intercellular communication is crucial to maintain normal functionality. However, even though the biological pathways...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Resident and migratory avifauna in the Willamette Valley, Oregon are heavily influenced by winter conditions and habitat characteristics, especially those of wetlands. As such, it is important to monitor avian communities and environmental factors at wetland sites within the Willamette Valley during winter. Using data from standardized avian point-count surveys,...
This thesis presents a novel design for a rheometer style viscometer by implementing high temperature and inert atmospheric requirements on the device. The goals of this device are to measure the viscosity of high temperature molten salts, which are corrosive and extremely hydroscopic. It also aims to be able to...
Natural resources play a crucial role in human society by providing both market value and non-market value. Effective management of these resources is necessary to achieve a balance between economic value and other non-market benefits. Econometric studies focusing on natural resource management help us understand the costs and benefits of...
Tanzania has seen a steady decrease in HIV prevalence over the past decade; however, the current HIV prevalence is 4.8% among Tanzanian adults. HIV testing is the first step in the treatment cascade and is key to getting those living with HIV in Tanzania linked to care and reducing their...
Concrete has been categorized as a key contributor of CO2 (carbon) emissions into the atmosphere. This is mostly associated with the production of ordinary portland cement (OPC). The concrete and cement industries are pursuing a path to reduce their carbon emissions generally in accordance with the climate change goals outlined...
In the past fifty years, per- and polyfluoroalkyl substances (PFASs) have become alarming global pollutants. In 2019, the United States (U.S.) Environmental Protection Agency (EPA) ultimately classified them as emerging contaminants and established an action plan to address PFAS and protect public health through developing, identifying, monitoring, and remediating current...
In recent decades, the occurrence of large, high severity wildfires has increased substantially in many parts of the world, including the western United States. These fires have the potential to impact water quality, aquatic ecosystems, and downstream communities for many decades. As such, it is increasingly important to understand the...
Sexual and gender minority (SGM) samples report elevated rates of substance use and substance use disorder compared to their heterosexual and cisgender counterparts across a wide variety of substances (Connolly & Gilchrist, 2020; Krueger et al., 2020; Rice et al., 2019), in part due to the experience of minority stress....
Toxin production by cyanobacterial harmful algal blooms (cyanoHABs) in freshwater systems has lasting ecological and human impacts. Nutrients, light availability, hydrology, and microbial community composition impact the frequency and intensity of toxic cyanoHABs. Climate change will exacerbate toxic cyanoHABs, making real time and predictive monitoring a vital tool for managing...
Molten salts have been targeted as a promising coolant for next generation reactors due to their high boiling point, heat capacity, and thermal conductivity. Despite these benefits, molten salt systems present unique materials compatibility issues, highlighted by the aggressive corrosion attack and dealloying typically seen on materials in these environments....
Over the last two centuries, Pilsner beer has become a symbol of Czech national identity. Originating in the Western Czech town of Plzeň, the unique color and flavor spread globally, with new styles further branching off the Central European stem. It is with great pride that the Czech people are...
The objective of this dissertation is to enhance the monitoring of forest ecosystems through the utilization of remotely sensed data to address the exigencies posed by the Anthropocene. On a global scale, rising temperatures and fluctuating precipitation patterns have strained forests and produced shifts in natural disturbance regimes. Additionally, the...
The Oregon coast faces complex environmental and social challenges, such as the threat of a regionally disastrous Cascadia Subduction Zone (CSZ) earthquake and tsunami. Researchers are united in their assertion that the CSZ is new, the region is due for a quake, and to mitigate this hazard society must collaborate...
This thesis examines the origins and outcomes of Operation Paperclip, a program the U.S. government operated in the years immediately following WWII to recruit former Nazi doctors, scientists, and technicians, and capitalize on their research experience. As part of this operation, the U.S. welcomed two doctors who had conducted medical...
This paper synthesizes various works Wang tiles up to this point, including: the reduction from the Halting Problem to Wang Tiling Problem and notions around various aspects of periodicity, including minimal period, aperiodicity, and axis-aligned periodicity. Additionally it includes new work, including: a proof that a tiling can be periodic...
Skeletal muscle mitochondria are highly plastic organelles, integral to whole-body health. High-fat diet (HFD) and exercise remodel the skeletal muscle mitochondria. Whereby, altered skeletal muscle mitochondrial function is linked to decreased skeletal muscle insulin sensitivity which can be reversed by exercise. However, the mechanisms that contribute to skeletal muscle remodeling...
. .......................................................................................................................... 52
Figure 3.1 Study design (A) and metabolic study day protocol (B
In 2022, the Report Card on Physical Activity for Children and Youth noted only 24% of children ages 6 to 17 years achieved the recommended 60 minutes of physical activity daily, with a drop in physical activity as children age (Barriss, 2022). More importantly, children with disabilities have been found...
In the most recent decades, there has been extensive loss of seagrasses within the Indian River Lagoon estuary on the eastern coast of Florida. This decline poses a significant threat to the ecological function of the ecosystem, as well as to the social and economic wellbeing of the surrounding communities....
The body of work aims to contribute to the area of Quantitative analysis in Environmental Sciences, and is focused on the microbiome. The underlying theme for the dissertation is methods and workflow. The unique bioinformatics workflow used for the analysis of genomic data was used to answer distinct and pressing...
Oil is notorious for its volatility. Often as an indicator for economic wellbeing, the commodity employs millions across the country. Entire communities in the western United States are centered around oil extraction, with employment, livelihoods, and revenues dependent on oil’s success. This combination of factors begs the question, how do...
Consistent with its charge under Oregon House Bill 3543, the Oregon Climate Change Research Institute (OCCRI) conducts a biennial assessment of the state of climate change science, including biological, physical, and social science, as it relates to Oregon and the likely effects of climate change on Oregon. This sixth Oregon...
Bibliographia Bopyridarum is prepared and maintained by John Markham, Arch Cape, Oregon, USA. Any reports of errors or omissions are greatly appreciated. Please contact Dr. Markham with suggestions: jmarkham@seasurf.net This file is updated annually.
Molecular phylogenetic and chemical analyses, and morphological characterization of collections of North American Paraisaria specimens support the description of two new species and two new combinations for known species. P. cascadensis sp. nov. is a pathogen of Cyphoderris (Orthoptera) from the Pacific Northwest USA and P. pseudoheteropoda sp. nov. is...
Understanding the effects of disturbance and restoration on a species’ habitat is essential for understanding the demographic rates and population trends observed in a species. Sufficient habitat provides the space and resources required for survival and successful reproduction, such as food availability, access to water, protection from predators, protection from...
Multi-robot teams offer promising solutions for many long term deployments in remote and dangerous domains, such as extraterrestrial or underseas exploration. However, long term deployments present many problems preventing robot teams from operating effectively. Learning over long time scales is makes it difficult to assign credit to robots' actions, as...
Increased automation and computerization have led to new demands and people are quickly transitioning to monitoring automated process and autonomous machines. Human oversight of automated process is important and desired, but people often require aid to navigate information from autonomous sources. An effective way to manage this information is with...
Simultaneous speech translation (SimulST) is widely useful in many cross-lingual communication scenarios, including multinational conferences and international traveling. Since text-based simultaneous machine translation (SimulMT) has achieved great success in recent years. The conventional cascaded approach for SimulST uses a pipeline of streaming ASR followed by simultaneous MT but suffers from...
The focus of this thesis is to design, characterize, and apply novel computational methods and molecular systems to interrogate heterogeneous human gut microbiome-related phenomena. In Chapter 2, I design, implement, and characterize a method for embedding co-occurrence patterns derived from massive 16s amplicon datasets. I use this method to 1....