The accurate determination of cloud cover amount is important for characterizing the role of cloud feedbacks in the climate system. Clouds have a large influence on the climate system through their effect on the earth's radiation budget. As indicated by the NASA Earth Radiation Budget Experiment (ERBE), the change in...
A radiation model was developed for retrieving cloud visible optical depth,
droplet effective radius, and cloud top emission temperature using AVHRR satellite
observations at 0.63, 3.7, and 11 μm. The model was used to determine the sensitivity
of the retrieved properties to various approximations often employed in such retrievals.
Droplet...
Studies using International Satellite Cloud Climatology Project (ISCCP) data have reported decreases in cloud optical depth with increasing temperature, thereby suggesting a positive feedback in cloud optical depth as climate warms. The negative cloud optical depth and temperature relationships are questioned because ISCCP employs threshold assumptions to identify cloudy pixels...
Inkjet-printed p-type copper(I) iodide-based TFTs were successfully fabricated. As-printed copper(I) halide semiconductor films, such as CuI, CuBrI, and CuClI, were used as p-type active channel layers for TFTs. The entire process of the TFTs fabrication was maintained under 150 °C, which is compatible with flexible plastic substrates and transparent glass...
Metal-organic frameworks (MOFs) have gained increasing attention due to their promising applications (e.g., gas storage/separations, and catalysis) as nanoporous materials stemming from generally ultrahigh porosities and surface areas. Recently, research has shifted to synthesize MOF thin films and micropatterns that enable new applications (e.g., optoelectronics, smart coatings, and sensors).
In...
Symbiosis is the close and protracted interaction between organisms. The molecular interactions that occur during symbiosis are complex with multiple barriers that must be overcome. Many Gram-negative, host-associated bacteria use a type III secretion system to mediate associations with their eukaryotic hosts. This secretion system is a specialized apparatus for...
Polycyclic aromatic hydrocarbons (PAHs) are known to cause adverse health effects in the human lung. Here, we evaluated biomarkers relevant for PAH toxicity in a 3D human primary bronchial epithelial cell (HBEC) model collected from normal and asthmatic donors. We previously found that PAHs decrease cellular barrier function integrity, which...
Metal oxide nanocrystals have attracted significant interests due to their unique chemical, physical, and electrical properties which depend on their size and structure. In this study, a continuous flow microreactor system was employed to synthesize metal oxide nanocrystals in aqueous solution. Assembly of nanocrystals is considered one of the most...
The continuous development of higher performing battery materials has emerged in parallel with the development of new manufacturing processes. Nanomaterials are one solution to addressing the cycling and performance challenges that limit existing battery cells. However, many of the methods used today for nanomaterial synthesis are high temperature batch methods...
The primary goal of this thesis is to synthesize titanium dioxide nanorods using a continuous flow microreactor. Titania powder, one of the most important particulate materials is used for many purposes owing to its excellent optical properties of a high refractive index leading to high hiding power and whiteness of...
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Chih-Hung Chang
The primary goal of this thesis is to synthesize titanium dioxide nanorods
Plant pathogenic Rhodococcus species are persistent pathogens able to cause severe growth deformities on a large range of hosts. The most well studied species, R. fascians is predicted by current models to synthesize a mixture of cytokinins that act to directly perturb the hosts' hormone balances, which results in abnormal...
Symbioses between microbes and multicellular eukaryotes are found in all biomes, and encompass a spectrum of symbiotic lifestyles that includes parasitism and disease, commensalism, and mutually beneficial interdependent host-microbe relationships. Regardless of outcome, these symbiotic lifestyles are governed by a complex molecular "courtship" between microbe and potential host. This courtship...
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Jeff H. Chang
Symbioses between microbes and multicellular eukaryotes are found in all
The continuous microreactor-assisted solution deposition (MASD) process was used for the deposition of CdS thin films on fluorine-doped tin oxide (FTO) glass. The MASD system, including a T-junction micromixer and a microchannel heat exchanger is capable of isolating the homogeneous particle precipitation from the heterogeneous surface reaction. The results show...
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Chih-Hung Chang
The continuous microreactor-assisted solution deposition (MASD) process
was
Recent advances in nanocrystalline materials production are expected to impact the development of next generation low-cost and/or high efficiency solar cells. For example, semiconductor nanocrystal inks are used to lower the fabrication cost of the absorber layers of the solar cells. In addition, some quantum confined nanocrystals display electron-hole pair...
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Chih-Hung Chang
Recent advances in nanocrystalline materials production are expected to
Light trapping plays a phenomenal role in enhancing light confinement and light absorption within the solar cells, thus increasing the optical efficiency of the cell. Different strategies are employed for trapping light photons within the cell. Methods used include a substrate or single layer texturing, light trapping coating, plasmonic gratings,...
Solar cells, also known as photovoltaic devices, are a class of renewable energy systems that can convert photons into electrons without the carbon dioxide emission. Short-wavelength, high-energy photons in the ultraviolet (UV) range can't be efficiently utilized by most solar cells because of the spectral mismatch. Luminescent downshifting is a...
Gall-associated phytopathogens have unique evolutionary histories that haveshaped both their modes of infection and genomic structures. Pathogenicity of the gall-associated plant pathogens of the Rhodococcus, Agrobacterium, and Rathayibactergenera is mediated by horizontally acquired virulence loci. The relative ease of gainand loss of the virulence loci has confounded accurate characterization of...
There is an emerging interest in developing wearable electronics as a platform, which
provides the flexibility of a wearable while maintaining its promising functionality as smart textiles. Metal-halide semiconductors are attractive materials with tunable optical and electrical properties. Researchers have widely studied and applied it for advanced
photonics and optoelectronic...
A unique microreactor-assisted nanomaterial synthesis and printing process was studied for the fabrication of patterned metal oxide nanostructured thin films. The process uses a continuous flow microreactor to control and generate a reactive chemical flux that was transported to a patterned microfluidic channel. The microreactor-assisted nanomaterial synthesis process can generate...
Dendrimers are nanoscale macromolecules that have highly branched, core-shell structures. Higher generation dendrimers have close-packed peripheral functional groups and a hollow interior. The chemistry of the core and the terminal functionalities can be tailored according to the specific application. These structural characteristics provide room for the design of dendrimers to...
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Chih-hung Chang
Dendrimers are nanoscale macromolecules that have highly branched, core-shell
The environmental health science community recognizes polycyclic aromatic hydrocarbons (PAHs) as a re-emerging class of environmental pollutants due to their persistence and prominence in mixtures of concern. Due to their widespread distribution in the environment, exposure to PAHs often occur as complex chemical mixtures. Exposures are linked to numerous adverse...
A functional test battery (FTB), which combines the use of subjective and objective functional measures, has been proposed as a potential means to distinguish anterior cruciate ligament reconstructed (ACLR) patients' that can more safely participate in activity from those at greater risk. However, no previous study has directly assessed whether...
For ras gene mutation analysis in the rainbow trout (Oncorhynchus
mykiss) model system, a partial trout ras sequence was identified
using the polymerase chain reaction (PCR). Two synthetic
oligonucleotides based on rat K-ras gene sequence were used as
primers for the PCR procedure. A 90 base pair (bp) sequence,
referred...
Previous research has shown that using fine lightweight aggregate (FLWA) can be a promising strategy to mitigate alkali-silica reaction (ASR) in mortar and concrete. While several possible theories were proposed by researchers, discrepancies in testing methods, materials, and supporting evidence still exist. Therefore, this study was initiated. There are two...
Transmit beamforming is an important technique employed to improve efficiency and signal quality in wireless communication systems by steering signals towards their in- tended users. It often arises jointly with the antenna selection problem due to various reasons, such as limited number of radio frequency (RF) chains and energy/resource effi-...
DNA from the human squamous carcinoma cell line, SK-MES-1, and the
plasmids, pUC EJ6.6 containing H-ras oncogene, pSVc-mycl containing
cellular myc gene, pNRSac containing N-ras oncogene, pBR SV containing
SV40 virus DNA, pSV2-neu containing neu oncogene and pSV2-neo
containing neomycin resistant gene were used to transform Balb serum-free
derived mouse...
CREEDA (Crop Rotation Economic and Environmental Impact Decision Aid) is a Windows application for assessing economic and environmental impacts of agricultural activities. In implementing it, we extended the ProCosts database and incorporated the RUSLE (Revised Universal Soil-Loss Equation) application and the SCI (Soil Conditioning Index) application as COM components. ProCosts,...
Pattern recognition techniques and their application to a
consumer behavior study are presented. The Local Majority Method
(LOMAME) utilizes a set of prototypes and corrective factors which
undergo a training cycle before being utilized as pattern classifiers.
Its advantages over the Minimum-Distance Method and the Fix
and Hodges Method are...
Alternating temperature (22°C / -1°C) pretreatments were effective for
increasing cold hardiness and recovery of cryopreserved meristems. Combining low
temperature pretreatment with abscisic acid (ABA) or sucrose treatments reduced the
time required for optimal cold hardiness of meristems. Desiccation tolerance was
directly correlated with increased cold hardiness and recovery of...
Product formulation and in vitro dissolution characteristics of sustained-release chewable tablet dosage
forms are presented in chapter one of this thesis. In vivo
single dose and multiple dose studies of two
sustained-release formulations as well as one conventional
dyphylline formulation are described in chapter two. The
pharmacokinetics of dyphylline following...
In this thesis, A nonlinear methodology for the control of the highly
maneuverable, high performance aircraft HARV (F-18) is studied by using sliding-mode
control (SMC). This control law, which takes a continuous function when the
input constraints are not considered, satisfies the reachability condition by which
concerned states are driven...
The anticonvulsant drug carbamazepine (CBZ) is a commonly prescribed drug that is used to treat patients with neurological disorders including epilepsy and bi-polar disorder. CBZ has a narrow range of efficacy: Below the therapeutic dose, seizures and other conditions are not controlled, and above the recommended window, patients experience side...
Paper-based assays for HIV diagnosis are cheap, portable, and require little to no skilled training, electricity, or expensive equipment to perform successfully. However, there is a need for tests with lower limits of detection (LOD) for diagnosing infection at the earliest stages. Effective labeling to increase signal-to-noise ratio is critical...
Personal health monitoring tools, a subset of point-of care-diagnostics, enable more frequent testing of chronic health conditions outside of a clinic setting and can inform personalized therapy or support telehealth diagnostic capabilities. While there is evidence that regular monitoring of chronic conditions can lead to better health outcomes and lower...
We consider the problem of computing the cannonical polyadic decomposition (CPD) for large-scale dense tensors. This work is a combination of alternating least squares and fiber sampling. Data sparsity can be leveraged to handle large tensor CPD, but this route is not feasible for dense data. Inspired by stochastic optimization's...
Pseudomonas syringae are plant pathogenic bacteria that cause disease by rapidly multiplying within the aboveground tissues of host plants. Growth of P. syringae within plant host tissues requires the disarmament of host immune defenses that limit microbial growth. To combat host defenses, P. syringae deploys a type III secretion system...
Previous studies indicated that fertigating with nitrogen (N) was more effective than using granular N fertilizers in production of northern highbush blueberry (Vaccinium corymbosum L.). To build on these findings, four studies were conducted in western Oregon to determine whether fertigation was also an effective method for applying other nutrients,...
After joining the WTO, easier access to Taiwanese market due to tariff reductions and deregulation of import restriction is expected to have substantial impacts on the fishery sector in Taiwan. Comparing to the tariff rates in 2001, the average tariff rates of fishery products will decrease 35.5%, in 2004. Especially,...
Prior to cell cleavage, cytokinetic proteins are recruited into the nascent actomyosin contractile ring. Interactions between spindle microtubules and the cell cortex play a critical role in this recruitment. However, direct evidence for physical interaction between microtubules and the cortex has been lacking. Here we reveal the physical connection between...
In the field of civil infrastructure, bridge desks are typically constructed using high performance concrete (HPC). Concrete bridge decks demand qualities such as low permeability, high abrasion resistance, superior durability, and long design life. Over decades of field and laboratory experience, many HPC bridge decks have been found to be...
Ferrites have been used for various high frequency applications as bulk
materials. These applications, however, are limited to large dimension devices. In
this thesis, thin film ferrites were deposited from a low temperature solution-based
deposition process that is suitable for micro-scale high frequency applications. The
low temperature nature of this...
Assembly of nanocrystals is considered one of the most promising approaches to design nano-, microstructures, and complex mesoscopic architectures. A variety of strategies to induce nanocrystal assembly have been reported, including directed assembly methods that apply external forces to fabricate assembled structures. In this study ZnO nanocrystals were synthesized in...
Respiratory infections caused by nontuberculous mycobacteria (NTM), especially Mycobacterium avium, can lead to progressive, recurrent disease that is refractory to therapy. Bacterial biofilms are intrinsically resistant to a variety of stressors and pressures, including host killing mechanisms and antibiotic therapy. Though it is becoming increasingly evident that NTM biofilms are...
Pesticides benefit agriculture by increasing crop yield, quality, and security. However, pesticides may inadvertently harm bees, which are valuable as pollinators. Thus, candidate pesticides in development pipelines must be assessed for toxicity to bees.
Leveraging a data set of 382 molecules with toxicity labels from honey bee exposure experiments, we...
A continuous flow sonochemical reactor was developed capable of producing metastable cadmium sulfide (CdS) nanoplatelets with thicknesses at or below 10 nm. The continuous flow sonochemical reactor included the passive in-line micromixing of reagents prior to sonochemical reaction. Synthesis results were compared with those from reactors involving batch conventional heating...
This thesis explores the roles of scripts in shaping minoritarian subjectivity through Kim Jee-woon’s film The Good, The Bad, The Weird (2008), Kim Fu’s novel For Today I Am a Boy (2014), and R. Zamora Linmark’s novel Rolling the R’s (1995). In all three works, diasporic characters of Asian descent...
Diatoms are single celled eukaryotic microalgae that self-assemble complex SiO₂
nanostructures by sillafin proteins within their cell wall. There has been increasing
interest in mimicking the diatom’s silica self-assembly process for fabricating metal
oxide nanoparticles, namely germanium dioxide (GeO₂). GeO₂ has a higher refractive
index than silica, enabling it to...
Characterizing the hydrophobicity of nanoparticles can help us understand their fate and transport in the environment, as well as how nanoparticles may interact with biological systems. However, contact angle and partition coefficient have limitations in measuring the hydrophobicity of nanoparticles, thus promising methods to measuring the hydrophobicity of nanoparticles are...
In Intense Pulsed Light (IPL) sintering, pulsed large-area visible light from a xenon lamp is absorbed by nanoparticle films or patterns and converted to heat, resulting in rapid sintering of the nanoparticles. This work experimentally characterizes IPL sintering of silver nanoparticle films. A newly observed turning point in the evolution...
Wood-based composites (WBCs) are an important sector of the US economy. For a WBC product to succeed, understanding its long-term durability, including seasonal variations in temperature and humidity, is critical. Durability is especially important WBCs because they are predominantly made from wood, which is a biological, hygroscopic material that is...
Most of existing commercial unsaturated polyester (UPE) resins are typically composed of a UPE and a high amount of highly volatile, flammable, and toxic styrene. The emission of hazardous styrene in the handling of the UPE resins and the preparation and use of fiber-reinforced UPE composites poses severe hazards to...
Pseudomonas aeruginosa is an environmental bacterium as well as an opportunistic pathogen that primarily infects immunocompromised individuals, including those suffering from cystic fibrosis. The density-dependent regulation of gene expression via cell-to-cell communication, also termed quorum sensing (QS), is an important virulence determinant in this organism. Generally, P. aeruginosa uses three...
Many Gram-negative bacteria use a type III secretion system (T3SS) to establish associations with their hosts. The T3SS is a conduit for direct injection of type-III effector proteins into host cells, where they manipulate the host for the benefit of the infecting bacterium. For plant-associated pathogens, the variations in number...
Mud volcanoes (MVs) are considered as important methane (CH₄) sources for the
atmosphere; gas is not only released from macroseepage, i.e., from craters and visible gas bubbling
manifestations, but also from invisible and pervasive exhalation from the ground, named miniseepage.
CH₄ flux related to miniseepage was measured only in a...
Hyperspectral images consist of intensity measurements associated with a large number of EM wavelengths per pixel. When a pixel contains a single material, the measurements of the pixel match the spectral signature of the material. When multiple materials are present in a single pixel, spectral mixing occurs, and signatures of...
Cell-to-cell communication by chemical signals, termed quorum sensing (QS), is a common regulatory scheme in the microbial world. Pseudomonas aeruginosa¸ an opportunistic pathogen of burn wounds and cystic fibrosis lungs, uses QS to control the expression of hundreds of genes, particularly those necessary for population level benefits such as biofilm...
Cell-cell communication in bacteria is understood to facilitate the coordination of population-wide cooperative behavior in the form of concerted gene expression. The opportunistic pathogen Pseudomonas aeruginosa uses such a communication mechanism to regulate a large group of genes important to virulence strategies in this bacterium. This general mechanism of communication...
Managers of forest and plantation ecosystems are encountering growing problems involving plant pathogens and the expanding geographic ranges of these pathogens. Historically unexposed stands are exceptionally vulnerable when a non-native pathogen is introduced because these pathogens can cause devastating disease in a host population that lacks co-evolved resistance mechanisms. One...
Histone deacetylase (HDAC) inhibitors have the potential to de-repress epigenetically silenced genes in cancer cells, leading to cell cycle arrest and apoptosis. Dietary HDAC inhibitors derived from natural phytochemicals are promising anticancer agents. In this thesis, metabolites from natural organosulfur and organoselenium compounds, i.e. allyl mercaptan (AM), β-methylselenopyruvate (MSP) and...
Cooperative behaviors in bacteria are increasingly appreciated for their relevance to microbial ecology and utility as model systems for social evolution. One example is the secretion of siderophores, a structurally diverse group of compounds that chelate extracellular iron. Siderophore production is considered cooperative because the benefits can be shared with...
Porous carbon is indispensable in modern technology applications. It is used for energy storage, gas separation, water purification, catalyst support, and chromatography. The diversity of its applications stems from its unique properties, including high specific surface area, tunable pore volume, and chemical stability. Specifically, the large surface area provides high...
The development of micro total analysis systems (µTAS), also called “lab-on-a-chip”, or microfluidic analysis systems, is presented in this dissertation. Various research areas, covering subjects from magnetic particles synthesis to novel microchip fabrication techniques, are explored to develop a lab-on-a-chip system capable of performing magnetic bead-based bioassays. These devices are...
Transcriptomics and gene expression profiling enables the elucidation of the genetic response of an organism to various environmental cues. Transcriptomics enables the deciphering of differences between two closely related organisms to the same environment and in contrast, enables the elucidation of genetic responses of the same organism to different environmental...
Pseudomonas aeruginosa is an opportunistic human pathogen that infects immunocompromised individuals such as those suffering from burns or the genetic disorder cystic fibrosis. This organism utilizes a cell-cell communication mechanism known as quorum sensing (QS) to coordinate virulence gene expression and biofilm formation. It has three interconnected QS systems, namely...
Nanotechnology products have long since made their way to markets around the world increasing the concerns about whether nanomaterials pose a risk to our environment or health. It has been suggested that engineered nanomaterial (ENM) with broad applications and rapid commercialization need better risk assessment and regulation. However, the refinement...
This dissertation focuses on extending the application scope of surface enhanced infrared absorption spectroscopy to gas sensing. The method we propose is incorporating plasmonic nanostructures with nano-composite material, metalorganic framework, which can selectively preconcentrate certain gas molecules into the nanopores. The preconcentrating property is first demonstrated by applying metal-organic framework...
Photobiological hydrogen production -- the use of photosynthesis to split water into hydrogen and oxygen -- presents an opportunity for efficient and large-scale solar biofuel development. One of the major challenges in this area is competition for reductant between the hydrogen-evolving hydrogenase enzyme and other metabolic pathways. In this work...
RNA-Sequencing (RNA-Seq) has rapidly become the de facto technique in transcriptome studies. However, established statistical methods for analyzing experimental and observational microarray studies need to be revised or completely re-invented to accommodate RNA-Seq data's unique characteristics. In this dissertation, we focus on statistical analyses performed at two particular stages in...
The development of nanomaterials and the potential enhancement of their chemical, mechanical, electrical, and optical properties have led to the investigation of methods for their synthesis at lower cost with enhanced performance for next generation devices. Along with the pursuit of new materials that exhibit properties of interest, industry requires...
Having a series of excellent properties, the oxide dispersion-strengthened (ODS) steels provide promising solutions for the challenges of structural materials in nuclear energy, especially the development of future advanced nuclear fission and even fusion reactors. The current manufacturing route for ODS alloys includes mechanical alloying (MA) of master alloys or...
Nanostructured ZnO films were obtained via thermal oxidation of thin films formed with metallic Zn-nanoparticle dispersions. Commercial zinc nanoparticles used for this work were characterized by microscopic and thermal analysis methods to analyze the Zn-ZnO core shell structure, surface morphology and oxidation characteristics. These dispersions were spin-coated on SiO₂/Si substrates...
Batch cultures of Candidatus Pelagibacter ubique were grown under iron-, organosulfur-, and nitrogen-limiting conditions to understand how this ubiquitous marine bacterium responds to and interacts with environments where growth is limited by the availability of these nutrients. Global gene expression was monitored using microarrays and quantitative mass spectrometry to observe...
In this work, continuous synthesis routes for binary nanoparticles using advantages of microchannel mixing (low diffusion distances and higher mass transfer) and fast heating rates provided by ultrasound induced heating are investigated. In addition, the application of silica nanoparticles in anti-reflective coatings on glass and understanding the structure property-performance correlation...
The dissertation focuses on the engineering of light-matter interaction using plasmonic nanoparticles and metamaterials to achieve enhanced luminescence and based on which to improve the performance of biosensing and light-emitting technologies. We designed and fabricated a spectrum of nanostructures to exhibit particular dispersion relations capable of controlling the spontaneous emission...
The purpose of this research was to investigate the optoelectronic properties of the
Ge doped biosilica, mainly focused on the photoluminescence (PL) properties of
diatom frustules of N. frustulum that contain metabolically inserted germanium
oxide produced by a two-stage photobioreactor cultivation process. In order to
explain the observed PL intensity...
Femtosecond stimulated Raman spectroscopy (FSRS) is an ultrafast vibrational technique which allows rapid collection of Raman spectra with simultaneously high temporal and spectral resolution. With the recent development of FSRS methodology, three FSRS techniques (conventional, tunable, and anti-Stokes) have been implemented in our laboratory to dissect the excited state structural...
Advances in energy technologies and electronics have typically occurred through either heightened performance or cost reduction. This dissertation explores both routes through a series of fundamental material studies that may contribute to the enabling of next generation devices. Solution based syntheses and deposition of chemical products offer a low cost...
Plant sexual reproduction requires a broad array of molecular mechanisms to proceed successfully. Some of these mechanisms are well-studied, but our knowledge of them as a whole is fundamentally incomplete. Pollen tube growth is a key part of this process, facilitating the delivery of the sperm cells to the female...
Limnology is undergoing a transition to high-throughput -omic analysis of freshwater
bacterial communities. An important first step in making the transition is to
characterize several genomes that can be used as references to guide metagenome
assembly and analysis. Here I characterize four new freshwater cyanobacterial
genomes, a pair of lake...
Hydrogen is the green fuel that can be produced from water through electrolysis and used via hydrogen fuel cells to generate electricity with zero carbon dioxide emission. The commercialization of electrolyzers and fuel cells is the critical step to achieving global carbon neutrality. However, it is severely hampered by the...
The European hazelnut (Corylus avellana L.) is a tree nut crop that is important in Oregon, which produces 99% of the United States’ hazelnuts but only 5% of the world’s supply. In order to maintain this market share, farmers in Oregon need cultivars that produce high quality nuts, mature early,...
Marine diatoms are unicellular photosynthetic organisms that produce unique nanomaterials, energy dense lipid-molecules, and specialty carbohydrate molecules that can be all extracted from a single microorganism. The centric marine diatom Cyclotella sp. was used as a model organism for cultivation in a biorefinery system, where multiple co-products can be harvested...
PDMS membrane-based microvalves are becoming increasingly more important for the control of fluid flow within MECS applications such as microreactors used to synthesize nanoparticles and biological macromolecules. The motivation for pursuing PDMS membrane-based microvalves is for implementing a plug flow microreactor to simulate slug flow yielding a narrower residence time...
Atmospheric pressure plasma is non-thermal at millimeter to micrometer separations. It represents an alternative low exergy initiator of many chemical reactions. In many instances heat, light or sound are not efficient providers of the necessary energy to overcome chemical activation barriers. The focus of this research is applying dc nonthermal...
RNA interference pathways can involve amplification of secondary siRNAs by RNA-dependent RNA polymerases. In plants, RDR6-dependent secondary siRNAs, including transacting siRNAs (tasiRNAs), arise from transcripts targeted by some microRNAs (miRNAs). In the case of TAS3 tasiRNA formation, ARGONAUTE7 (AGO7)-miR390 complexes interact with primary transcripts at two sites, resulting in recruitment...
Nonthermal plasmas generate high concentrations of excited species that can simultaneously exist at high energy and far from thermodynamic equilibrium, making them useful tools in chemistry and engineering. Microplasmas, roughly defined as plasmas that are generated within sub-millimeter dimensions, provide enhanced stability, improved excited species density, increased nonequilibrium properties, higher...
Water electrolysis plays a pivotal role in achieving a green hydrogen economy by sourcing electricity from intermittent renewable sources. However, the efficiency of the electrolysis process is limited by the sluggish oxygen evolution reaction (OER) kinetics, whereas the kinetics of the hydrogen evolution reaction (HER) are more facile. This thesis...
In the 21st century, environmental deterioration is now an indisputable fact. Reliable and economically viable electricity systems based on renewable sources are urgently needed to replace the environmentally detrimental fossil fuels. The feasibility of incorporating renewable-but-intermittent solar and wind energy heavily depends on the development of cost-effective and safe technologies,...
Metal oxide clusters are promising inorganic photoresists in next generation nanomanufacturing because of their potential for high-resolution and low line-edge roughness patterning, and exceptional sensitivity to extreme ultraviolet (EUV) radiation. In EUV patterning, absorption of EUV radiation leads to electron emission that serve as a primary species for driving radiation...
Members of the SAR11 clade of heterotrophic α-proteobacteria are ubiquitous and abundant in the world's oceans where they are thought to play a pivotal role in the global carbon cycle. The first SAR11 bacterium cultivated in vitro, 'Candidatus Pelagibacter ubique' HTCC1062 (Ca. P. ubique), was isolated by dilution into sterile...
The role of volumetric energy density on the microstructural evolution, texture and mechanical properties of 304L stainless steel parts additively manufactured via selective laser melting process is investigated. 304L is chosen because it is a potential candidate to be used as a matrix in a metal matrix composite with nanoparticles...
The role of gold nanoparticles supported on ZnO in photocatalytic activity for dye degradation
was investigated. To do this, gold nanoparticles supported on ZnO (Au-ZnO) were prepared using a
simple co-precipitation method. The prepared nanocatalyst was characterized by high resolution
transmission electron microscopy, X-ray diffraction, temperature programmed reduction, X-ray
photoelectron...
When assessing differential gene expression from RNA sequencing data, commonly used statistical tests tend to have greater power to detect differential expression of genes encoding longer transcripts. This phenomenon, called "length bias", will influence subsequent analyses such as Gene Ontology enrichment analysis. In the presence of length bias, Gene Ontology...
Background: Potato virus Y (PVY) is one of the most important plant viruses affecting potato production. The
interactions between potato and PVY are complex and the outcome of the interactions depends on the potato
genotype, the PVY strain, and the environmental conditions. A potato cultivar can induce resistance to a...
Background
Potato Virus Y (PVY) is one of the most important plant viruses affecting potato production. The interactions between potato and PVY are complex and the outcome of the interactions depends on the potato genotype, the PVY strain, and the environmental conditions. A potato cultivar can induce resistance to a...
Johne’s disease is caused by Mycobacterium avium subsp. paratuberculosis (MAP), which results in serious economic losses worldwide in farmed livestock such as cattle, sheep, and goats. To control this disease, an effective vaccine with minimal adverse effects is needed. In order to identify a live vaccine for Johne’s disease, we...
Since the early 1980s, several investigations have focused on developing a vaccine against Mycobacterium avium subspecies paratuberculosis (MAP), the causative agent of Johne’s disease in cattle and sheep. These studies used whole-cell inactivated vaccines that have proven useful in limiting disease progression, but have not prevented infection. In contrast, modified...