Focus is published by Oregon State University College of Forestry. Our goal is to keep Forestry alumni, friends, faculty, staff, and students informed about the College of Forestry and its many activities and programs.
Focus is published by Oregon State University College of Forestry. Our goal is to keep Forestry alumni, friends, faculty, staff, and students informed about the College of Forestry and its many activities and programs.
Focus is published by Oregon State University College of Forestry. Our goal is to keep Forestry alumni, friends, faculty, staff, and students informed about the College of Forestry and its many activities and programs.
Listeria monocytogenes contamination continues to pose challenges for the food industry and there is demand for effective methods of food preservation and protection that can also be considered clean label. A promising source of antilisterial compounds may be sourced from bacteria that produce novel byproducts. Ribosomally synthesized and post-translationally modified...
Pacific salmon are an integral part of ecosystems, industry, culture, and food source. Rapid declines and extirpation in many populations and species have caught the interest of environmentalists, scientists, recreational anglers, commercial fishers, general public, and economists. Billions of dollars have been spent to restore, return, improve, sustain dwindling populations...
The Northern Rubber Boa (Charina bottae) is a small, secretive boa native to the Pacific Northwest. Despite this being possibly the highest latitude boas and one of only two boas native to the continental U.S., it has received surprisingly little attention. Most of the research on the natural history of...
The Goose Lake Basin, situated on the border of Oregon and California, USA, faces significant challenges from drought, wildfire, and other environmental stressors. This region hosts numerous endemic fish species such as the Goose Lake redband trout (Oncorhynchus mykiss newberri), Goose Lake lamprey (Entosphenus sp.), Goose Lake tui chub (Siphateles...
Modular construction is increasingly seen as an efficient construction method in terms of time, cost, and energy. The full realization of these advantages partly relies on the efficiency of the production process inside the modular factories, which currently rely on tedious manual monitoring methods or expensive automated techniques. As a...
Variation in cheese quality due to geographic location is important to cheese producers, consumers, and retailers on a global level. Understanding the impacts of geographic location of cheese plants may be useful to businesses for marketing, cost reduction, and quality improvement. Many aspects of variation due to geography have been...
The spring bloom is a key oceanic phenomenon in the Northern Gulf of Alaska (NGA), where it supports the regional ecosystem, fisheries, and CO2 sequestration. Despite its significance, mechanisms that trigger NGA blooms are still debated, largely due to a lack of sufficient data from late winter through spring. New...
Our experiments aimed to investigate responses of the marine cyanobacteria Prochlorococcus and Synechococcus to toxic arsenic species, such as arsenate, and to understand cellular mechanisms that contribute to arsenic tolerance. We used two strains of Prochlorococcus, a high-light adapted MED4 and low-light adapted MIT9313, both axenic, for cultivation experiments. For...
Motion planning is a cornerstone of autonomous robots, enabling robots to safely and efficiently perform tasks such as package delivery, infrastructure inspection, and manipulation. However, as the field of robotics matures, robotic systems are being developed that (1) are challenging to analytically model, (2) require computationally expensive model-based controllers, and...
The information in this report is for the purpose of informing cooperators in industry, colleagues at other universities, and others of the results of research in field crops. Reference to products and companies in this publication is for specific information only and does not endorse or recommend that product or...
The information in this report is for the purpose of informing cooperators in industry, colleagues at other universities, and others of the results of research in field crops. Reference to products and companies in this publication is for specific information only and does not endorse or recommend that product or...
Septoria canker remains the most important disease of poplars in intensively managed forest plantations. Genetic resistance has long been considered the best way to manage for this disease. Transgenic resistance mediated by RNA silencing against pathogens and pests (HIGS: host-induced gene silencing) has shown promise in other pathosystems but has...
The California Current Large Marine Ecosystem (CCLME), located on the eastern boundary of the North Pacific Ocean, is highly dynamic, with variable conditions driven by seasonal upwelling, regional oceanography, and broad scale climate patterns. In the last decade, the northeast Pacific Ocean has experienced several marine heatwaves (MHWs), prolonged periods...
Results from vegetation management trials involving horticultural crops conducted during the past year are compiled and reported by faculty members of the Oregon Agricultural Experiment Station, the Oregon State Extension Service, and colleagues who cooperated from adjacent states along with local enterprises. This work was conducted throughout Oregon and involved...
Results from vegetation management trials involving horticultural crops conducted during the past year are compiled and reported by faculty members of the Oregon Agricultural Experiment Station, the Oregon State Extension Service, and colleagues who cooperated from adjacent states along with local enterprises. This work was conducted throughout Oregon and involved...
Explainable Artificial Intelligence (XAI) systems aim to improve users’ understanding of AI but rarely consider the inclusivity aspects of XAI. Without inclusive approaches, improving explanations might not work well for everyone. This study investigates leveraging users’ diverse problem-solving styles as an inclusive strategy to fix an XAI prototype, with the...
Escalating demand for organic blueberries has driven a significant expansion of northern highbush blueberry (NHB; Vaccinium corymbosum L.) production area. This expansion is particularly pronounced in regions of the Pacific Northwest where native soil conditions are sub-optimal for NHB, notably east of the Cascade Mountain Range of Oregon and Washington,...
Determining the electrical properties of ceria-based materials is important for their use as electrodes in hot-wall magnetohydrodynamic (MHD) power generators with wall temperatures greater than 1500 ̊C. The electrical conductivity of a material can be used in models for predicting the performance of generator designs. More specifically, the temperature dependent...
In Oregon, the effects of climate change on agriculture are already being felt. In the Northwest, climate change impacts agricultural pest pressure, especially insects, whose life cycles are tied directly to weather and climate. The goal of this research was to record and analyze Oregon fruit and vegetable farmers’ relationships...
The present essay discusses themes of dehumanization and reliance on a biomedical model of care within U.S. psychiatric systems in treating individuals diagnosed with psychosis. This model is contrasted with alternative treatment approaches that are person-centered rather than disease-centered. These include Open Dialogue, Soteria, and Hearing Voices Movement. In the...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Oregon's estuaries are important ecosystems for scientific study. Consequently, knowledge of what research has been conducted helps us identify benchmarks and plan new projects. A comprehensive bibliography of published research, technical reports, local documents, and data sets is one means of recording this knowledge. For these reasons, the Guin Library...
Thermal oxidation of methyl oleate was studied over a range of temperatures from 50 C to 150 C for periods of time up to 30 min. Degradation was quantitatively followed by gas liquid chromatography (GLC) and liquid scintillation counting of the products of methyl oleate-U-14C heated under a stream of...
Persistent and uncontrolled inflammation is the root cause of various debilitating diseases. Given that interleukin-1 receptor–associated kinase 4 (IRAK4) is a critical modulator of inflammation, inhibition of its activity with selective drug molecules (IRAK4 inhibitors) represents a promising therapeutic strategy for inflammatory disorders. To exploit the full potential of this...
Harmful algal blooms (HABs) are a problem for coastal communities, the fishing industry, and coastal organisms. Pseudo-nitzschia spp. is a regularly occurring diatom in Oregon’s coastal waters. At times, Pseudo-nitzschia spp. can facultatively produce domoic acid, a neurotoxin that can bioaccumulate in the food chain. While regular shore-based sampling provides...
I conducted a field study using gray wolf and mountain lion urine to investigate white-tailed deer and mesopredator behavioral responses to novel predator cues in a natural setting and to see if any changes in wildlife activity correspond to changes in the local biodiversity of a wetland environment. I created...
Long-term, large-scale studies of meta-ecosystems provide critical information about how global change influences communities. In my dissertation, I analyzed data from studies encompassing 18 years (2006 – 2023) and over 1,000 km of coastline to investigate drivers of rocky intertidal community structure and dynamics. Specifically, I explored the roles of...
Dungeness crab (Cancer magister) is an important commercial species along the west coast of North America, and its population dynamics are highly influenced by interactions between environmental variability and early life history distribution. However, the distribution of the early larvae stages of Dungeness crab offshore is poorly known. To fill...
Anthropogenic induced climate change is predicted to alter distribution of existing plant populations. As plants migrate over space and time, populations often fragment and contract, affecting basic elements of population dynamics (e.g., population size, gene flow, genetic diversity, etc.). Little is known, however, how these impacts on plant species will...
Two studies evaluated the mineral status of supplemented beef cattle over two different methods of supplementation. The objective of study 1 was to evaluate the mineral status at weaning and subsequent post-weaning performance of calves supplemented prior to weaning, with limited-fed supplements fortified with trace minerals (Cu, Se, and Zn)...
Listeria monocytogenes is the third most deadly foodborne pathogen in the United States. The young and elderly, as well as pregnant and immunocompromised people are the population most susceptible to serious illness and death from listeriosis infections.
Unlike most foodborne pathogens, L. monocytogenes does not live a solely enteric lifestyle....
In this report, we present climate projections for Union County that are relevant to specified natural hazards for the 2020s (2010–2039) and 2050s (2040–2069) relative to the 1971–2000 historical baseline. The projections are based on multiple global climate models for both a lower greenhouse gas emissions scenario (RCP 4.5) and...
In this report, we present future climate projections for Polk County relevant to specified natural hazards for the 2020s (2010–2039) and 2050s (2040–2069) relative to the 1971–2000 historical baseline. We present projections that are based on multiple global climate models for both a lower greenhouse gas emissions scenario (RCP 4.5)...
In this report, we present climate projections for Morrow County that are relevant to specified natural hazards for the 2020s (2010–2039) and 2050s (2040–2069) relative to the 1971–2000 historical baseline. The projections are based on multiple global climate models for both a lower greenhouse gas emissions scenario (RCP 4.5) and...
In this report, we present climate projections for Douglas County that are relevant to specified natural hazards for the 2020s (2010–2039) and 2050s (2040–2069) relative to the 1971–2000 historical baseline. The projections are based on multiple global climate models for both a lower greenhouse gas emissions scenario (RCP 4.5) and...
In this report, we present future projections of climate and climate-related natural hazards in Benton County for the 2020s (2010–2039) and 2050s (2040–2069) relative to the 1971–2000 historical baseline. The projections are based on multiple global climate models for both a lower greenhouse gas emissions scenario (RCP 4.5) and a...
Forced removal of Indigenous communities and subsequent colonial forest management have led to landscape homogenization, fuel abundance, conifer encroachment, and, therefore, a loss of forest and fire resilience in the Western US. This loss of forest and fire resilience leads to a loss of social resilience as forested communities struggle...
Sound is a crucial aspect of the underwater environment for fishes – various species use sound to communicate, identify predators, navigate, and many other activities needed for survival in their habitat. Disruptions and disturbances in the natural soundscape can have important impacts on all these activities and are likely to...
The Peruvian cocoa sector has been growing quickly since the beginning of this century due to international demand for this commodity together with concentrated international cooperation, including NGOs and governmental agencies. Similarly, certification among cocoa producers has been growing quickly. Little is known regarding how certification impacts environmental and socioeconomic...
Diseases can be a substantial threat to woody plant production, a major industry in Oregon. Boxwood (Buxus spp.) and rhododendron (Rhododendron subgenus Rhododendron and Hymenanthes) represent the top two broadleaf evergreen woody plants by farmgate value in Oregon. Historically, Phytophthora root rot has been considered the most destructive disease of...
Coastal stream basins are of great importance to efforts aimed at refining our understanding of the earliest populations that inhabited the ancient Oregon coast. However, geomorphic responses to post-glacial sea level rise in these settings has produced depositional environments that destroy or deeply bury late Pleistocene and early Holocene-age archaeological...
In the United States, children from underserved racial/ethnic backgrounds encounter greater environmental risk both in terms of the physical environment (e.g., housing quality, access to resources like health services and jobs, and exposure to environmental toxins) and the social environment (e.g., social support, neighborhood crime, racism, and discrimination), due to...
Marine heatwaves (“MHWs”) are discrete periods of anomalously warm ocean conditions that can lead to shifts in the distribution and abundance of marine organisms. Low-trophic level, pelagic forage species are frequently among those affected by MHWs, often resulting in considerable impacts upon their predators. In the North Atlantic Ocean, Atlantic...
Concrete has been categorized as a key contributor of CO2 (carbon) emissions into the atmosphere. This is mostly associated with the production of ordinary portland cement (OPC). The concrete and cement industries are pursuing a path to reduce their carbon emissions generally in accordance with the climate change goals outlined...
As global atmospheric carbon emissions continue to rise, scientists and land managers are increasingly looking to natural ecosystems to sequester and store carbon to buffer the impacts of climate change. Despite their small geographic size, many coastal ecosystems such as salt marshes, seagrass meadows, and mangroves sequester large amounts of...
In recent years, monarch butterfly (Danaus plexippus) populations have declined at an alarming rate resulting in an extensive conservation effort across the species’ migratory range. One hypothesis for declining populations is decreased reproductive success during spring migration. The eastern monarch population’s first annual generation occurs in the early spring when...
My thesis is an exploration of xánthiip (Karuk for black oak, Quercus kelloggii) restoration within the Karuk Tribe’s Ancestral Territory in present-day northwestern California. Black oak is a cultural keystone species for the Karuk and has been chosen as one of the species to guide Tribally led forest restoration work...
This study is an ethnographic investigation of residential turnover, organizational memory, and the persistence of Lost Valley, an Oregon ecovillage founded in 1989. Literature on organizational turnover, memory, and persistence is reviewed and integrated with scholarship on intentional communities and ecovillages, generating a theoretical framework for data collection and analysis....
Pacific walrus (Odobenus rosmarus) are particularly vulnerable to the impacts of climate change due to the high reliance on sea ice for safety, transport, and social behaviors. Additionally, the walrus diet consists of predominantly bivalves, whose populations are in decline as a result of ocean acidification. We first determined the...
Multiagent approaches are well suited to designing autonomous solutions for systems that feature complex interactions between many individuals such as in autonomous traffic systems and multi-robot exploration systems. However, creating autonomous agents that function effectively in these systems is a challenging task. In these complex environments, agents need informative reward...
Assisted living facilities represent a large portion of the long-term care facilities in the United States. Although there are not uniform policies regulating assisted living facilities, debates on the best way to ensure adequate staffing center on two approaches: required ratios or acuity-based staffing. The purpose of this study is...
Molten salts have been targeted as a promising coolant for next generation reactors due to their high boiling point, heat capacity, and thermal conductivity. Despite these benefits, molten salt systems present unique materials compatibility issues, highlighted by the aggressive corrosion attack and dealloying typically seen on materials in these environments....
Cabbage maggot, Delia radicum (Diptera: Anthomyiidae) impacts the production of Brassicaceae crops worldwide. The larva feed on the roots of crops causing reductions in yields due to impaired root function and unmarketability of crops. Chemical and cultural management programs are commonly used to control cabbage maggot with varying rates of...
Sexual and gender minority (SGM) samples report elevated rates of substance use and substance use disorder compared to their heterosexual and cisgender counterparts across a wide variety of substances (Connolly & Gilchrist, 2020; Krueger et al., 2020; Rice et al., 2019), in part due to the experience of minority stress....
This dissertation delves into understanding, characterizing, and addressing dataset shift in deep learning, a pervasive issue for deployed machine learning systems. Integral aspects of the problem are examined: We start with the use of counterfactual explanations in order to characterize the behavior of deep reinforcement learning agents in visual input...
During the first full school year of the Covid-19 pandemic, two central contexts for adolescent development—home and school—changed utterly. In Oregon, most middle- and high schoolers attended school entirely remotely from the beginning of the pandemic, in March, 2020, through the end of April, 2021, removing both the supports available...
Bees play a crucial role in pollinating crops, supporting biodiversity, and maintaining ecosystem health. Despite their importance, the decline in bee populations has become a global concern due to various factors including habitat loss, urbanization, and climate change. The purpose of this thesis is to write an article that highlights...
Natural resources are essential to humanity. With the increase in global development in recent decades, people must monitor the state of the environment, whose disturbance has a more significant impact on society than before. However, conventional environmental monitoring is challenged in highly dynamic ecosystems and large areas. As a solution,...
I researched depictions of dragons in several works of modern literature to conceptualize what a dragon looks like and how they generally function in popular media. From there, I researched several key characteristics of dragons to see how they work with science’s current understanding. I looked into size and scaling,...
In 2022, the Report Card on Physical Activity for Children and Youth noted only 24% of children ages 6 to 17 years achieved the recommended 60 minutes of physical activity daily, with a drop in physical activity as children age (Barriss, 2022). More importantly, children with disabilities have been found...
Coastal communities rely on the abundant ecosystem services derived from robust conservation areas in offshore marine waters (Campbell, 2019). United Nations member states support the Sustainable Development Goal (SDG) framework, wherein the 14th guideline asserts the importance of life under water. Protected marine environments are critical to the survival of...
Despite being internationally recognized as basic human rights, water, sanitation, and hygiene (WASH) insecurity continues to exist throughout the United States, particularly among low-income and unhoused portions of the population. Previous investigations into the intersection of WASH and people experiencing homelessness (PEH) in the US have primarily taken place in...
Fiction facilitates the attribution of unrealistic character traits to scientists, and skews general understanding of the scientific process-- a fatal flaw resulting in self-doubt within undergraduate scientists, and apprehension and distrust in several communities. Misconceptions and the absence of significant ideas were identified by analyzing novels within the “Lab Lit”...
Little is known about the fall and winter ecology of hibernating bats in western North America. Filling knowledge gaps for these populations has become more urgent with the westward spread of the white-nose syndrome, a disease that infects bats during hibernation. Due to the thermal requirements of the fungal pathogen...
Natural products (a.k.a. secondary metabolites) are produced by living organisms that are not essential for their growth, development, or reproduction, but may play a role in their survival or adaptability in nature. Many secondary metabolites isolated from plants and microbes have found use as molecular probes, drug leads, or medicine...
The body of work aims to contribute to the area of Quantitative analysis in Environmental Sciences, and is focused on the microbiome. The underlying theme for the dissertation is methods and workflow. The unique bioinformatics workflow used for the analysis of genomic data was used to answer distinct and pressing...
Quick and accurate measurements of nanoparticles have important applications in biology, environmental and non-proliferation areas. Calculation of isotopic ratios, particularly in special nuclear materials, has relied on integration of nanoparticle counts and limited the capability of counting minor isotopes. Rapid transient detection method of nanoparticles has demonstrated the effectiveness of...
Following European-American colonization of North America and associated landscape changes, barred owls (Strix varia) underwent a dramatic expansion of their historical range. The barred owl expanded across the previously tree-less Great Plains that had limited their distribution, and into the forests along the west coast. In these western forests they...
Micro-plankton are a crucial component of pelagic food webs, responding rapidly to environmental changes, and providing a first step in the acquisition and transfer of nutrients to life in the ocean. In addition to the uptake of carbon, phytoplankton provide essential fatty acids (FAs) that can limit the growth of...
Weight-based stigmatization (WBS) exists in healthcare and can be categorized as direct, indirect, or structural. WBS is harmful to individual’s health and contributes to worse healthcare engagement, including reduced care satisfaction, patient-centered communication (PCC), and utilization of services. Little is known about young adults’ experiences of WBS in healthcare. Young...
Climate change is expected to increase the occurrence of many climate-related natural hazards. Confidence that the risk of heat waves will increase is very high given strong evidence in the peer-reviewed literature, consistency among the projections of different global climate models, and robust scientific principles that explain why temperatures increase...
Climate change, wildfire, timber harvest, and land conversion alter the availability of downed wood in forests of the western United States. Numerous taxa rely on downed wood for temperature and humidity refugia, and downed wood may play a key role in enabling the persistence of climate-sensitive, low-vagility species like terrestrial...
Small, private forestland owners own about 12% of Oregon’s forestland and have the unique ability to implement innovative forest management activities. In southwest Oregon, extreme ecological variability occurs over small spatial scales and requires fine-scale silvicultural treatments that match the precise ecological setting and management objectives of the forests in...
Asphalt pavements constitute more than ninety percent of the nation’s roadway network. Besides serving the key role of providing a smooth and durable all-weather surface that benefits a range of users, they are also the lifelines of the nation and the world and contribute tremendously towards economic and social development....
The Columbia River Gillnetter is the pilot of the Lower Columbia River commercial fishing industry, keeping fishermen and the public in touch with today's important issues.
The Columbia River Gillnetter is the pilot of the Lower Columbia River commercial fishing industry, keeping fishermen and the public in touch with today's important issues.
The Columbia River Gillnetter is the pilot of the Lower Columbia River commercial fishing industry, keeping fishermen and the public in touch with today's important issues.
The Columbia River Gillnetter is the pilot of the Lower Columbia River commercial fishing industry, keeping fishermen and the public in touch with today's important issues.
Oxidative dysfunction can affect dairy animals during periods of heightened stress, particularly during the transition from pregnancy to lactation and during diseases, such as intramammary infection (IMI), and can contribute to increased inflammation, immune dysfunction, and cell death. As such, methods for ameliorating oxidative stress and restoring redox regulation may...
The Large-Grain Data-Flow (LGDF) Machine is a tightly-coupled multi-processor consisting of several independent nodes, upon each of which may run one or more tasks. These tasks must be able to communicate and synchronize with each other. This document describes a message-passing system developed to meet these requirements.
The message-passing system...
The greater sage-grouse (Centrocercus urophasianus: hereafter; sage-grouse) population in Modoc County California is geographically isolated and has been subsidized by translocation to prevent inbreeding depression since 2005. Despite significant efforts to increase the population through translocations and habitat improvement by cutting encroaching western juniper (Juniperus occidentalis), only a single lek...
This paper presents the results of a controlled experiment comparing debugging abilities of novice, intermediate and skilled student programmers. Debugging performance differences were studied using two single-page Pascal programs: a binary search program and a median calculation program. Two types of semantic errors, array bounds and undefined variable, and two...
Many studies have shown that expert programmers are more effective at debugging programs than novice programmers. These studies have suggested that the major reason for this difference is due to the experts' superior comprehension of the program. This paper reports two experiments which investigated expert and novice student programmers program...
During the past year the rapid increase in the cost of copper and aluminum has led operating companies to investigate the feasibility of using iron and steel conductors for transmission and distribution purposes where small blocks of power are to be served. This Thesis gives the results of tests on...
Consistent with its charge under Oregon House Bill 3543, the Oregon Climate Change Research Institute (OCCRI) conducts a biennial assessment of the state of climate change science, including biological, physical, and social science, as it relates to Oregon and the likely effects of climate change on Oregon. This fifth Oregon...
Consistent with its charge under Oregon House Bill 3543, the Oregon Climate Change Research Institute (OCCRI) conducts a biennial assessment of the state of climate change science, including biological, physical, and social science, as it relates to Oregon and the likely effects of climate change on Oregon. This sixth Oregon...