Part 1:
White muscle disease (WMD), a degenerative muscle disease brought on by a deficiency of the essential trace nutrient selenium, is thought to be mediated by the protein Selenoprotein W (SeW). In its relationship with WMD, SeW, like many selenoproteins, binds to glutathione, serving some purpose in redox mechanisms...
The immigration boom at the turn of the century resulted in crisis, as the working classes crowded into tenement houses which became breeding pits for disease. Progressive reformers applied complex environment ideology to the housing crisis, blaming poor housing for various moral and social ills. While there tactics varied-from government...
On the surface, the written works of the Marquis de Sade appear to be nothing more than pornographic mania articulated, the narrative trajectory of which oscillates between illicit words and acts. Yet his life and works are important to historians, if not due to their inherent quality then because they...
This study examined how different urbanization patterns in France and the United States influenced the development of their respective housing markets. More specifically, the study analyzed the evolution of housing size in France and the United States during the 20th century. Descriptive statistical analysis and regression models were used to...
Riparian areas are an integral component of fluvial ecosystems. The management of Oregon's riparian areas has come under greater scrutiny since that latest revision of the Oregon Forest Practices Act (1994). Many riparian areas lie within forested areas. Riparian management issues such as anadromous fish population decline and large woody...
This study compares the requirements of three forest certification systems, the Sustainable Forestry Institute (SFI), the Forest Stewardship Council (FSC), and the International Organization for Standardization (ISO), with the 2005 McDonald-Dunn Forest Plan Revision. The analysis was done with a series of matrices comparing the requirements of SFI and FSC...
Although thousands of volunteers from the United States go abroad each year to teach English, many are unprepared for their experiences. Undergraduate students teaching in a foreign country seem to lack training in educational methodology or foreign relations that would prepare them for teaching and living abroad. This project was...
Surface acoustic wave (SAW) sensors are versatile devices that can be configured to sense a variety of measurands such as temperature and pressure. The potential use of surface acoustic wave devices for magnetic field detection is explored in this study. Compared to current magnetic field sensors, a sensor based on...
The opportunistic pathogen Pseudomonas aeruginosa possesses two LuxR-LuxI
type quorum-sensing systems that use diffusible acyl-homoserine lactone molecules to
autoinduce and coordinate expression of multiple virulence factors. We conducted a highthroughput
screen for mutants deficient in skim-milk proteolysis—a quorum-sensing
dependent phenotype—using a nonredundant transposon-insertion library representing
most nonessential genes in P....
High-throughput culturing (HTC) consisting of extinction culturing in autoclaved seawater has led to the isolation and characterization of many novel strains of oligotrophic marine bacteria. Strain HTCC 2207 was isolated from the Oregon coast by the HTC method. Phylogenetic analysis based on 16S rRNA gene sequence showed that this strain...
Since 1935, France has introduced a set of strict national wine rules and regulations, the Appellation d’Origine Contrôlée (AOC). The AOC limits fraud and oversees quality control by basing the rules on terroir. High quality from terroir comes has both physical and cultural factors. Before 1935, France produced a variety...
As time continues, the issue of full European Union membership for Norway becomes a more pertinent issue. The EU has long awaited the membership of Norway, but unfortunately the Nordic country has decided to remain independent. Norway’s historical past has led many Norwegians to believe their country is not ready...
The Elliptic Curve Digital Signature Algorithm (ECDSA) is a public key cryptosystem used for creation and verification of digital signatures in electronic documents. In this thesis, we created a Java applet that provides the functionality of the ECDSA using all of the NIST elliptic curves over GF(p). This applet was...
The Mayer-Salovey-Caruso Emotional Intelligence Test (MSCEIT) purports to assess emotional intelligence, which includes the ability to successfully identify and manage emotions. To test the validity of this claim, 21 students took the MSCIET along with a several other performance measures and personality scales, and their scores were correlated. The MSCEIT...
Genomic integrity is crucial for the viability and function of a cell. One key pathway that acts to
maintain genomic integrity is DNA mismatch repair (MMR). MMR acts to correct base pair
mismatches hat have escaped proofreading during DNA replication. The process of MMR is
dependent on the protein heterodimer...
The goal of this project was to determine whether an equine business in which the sole income is from the short term retraining and resale of horses could be successful. Horses would hypothetically be kept for not less than six months and not longer than one year, and priced from...
Literary fairy tales facilitate a specific inquiry into heroine quests. Due to the flexibility of the fairy tale genre, a variety of heroine tales have been produced. The specific stages of a heroine quest must be described in order to understand the direction and goals of these quests. In order...
A DC distribution system targeted for residential settings has been designed and
simulated. The system features the ability to draw power from both the utility and
photovoltaic arrays. In times of surplus solar energy, the system is able to supply power
back to the utility to facilitate net metering. The...
Research was conducted to determine the thermoelectric behavior of Co₉S₈, Co₉Se₈, CoSe, CoTe₂, CoSbSexSl-x (x=O, 0.25, 0.50, 0.75, 1.0), CoSbTe, AuTe₂, AuTe₁.₉₀Sb₀.₁₀, Au₀.₉₅Pt₀.₀₅Te₂, Au₀.₉₅Ag₀.₀₅Te₂, MnTe₂, MnTe₁.₉₅Sb₀.₀₅, MnTe₁.₉₀Sb₀.₁₀, CoSb₂, and Co₀.₉₅Fe₀.₀₅Sb₂. Recently discovered sodium cobalt oxide compounds have been found to have large Seebeck coefficients coupled with favorable thermal and electrical...
This undergraduate thesis provides an overview on analyzing and designing open-loop sampleand-
hold (S/H) circuits. It also describes a technique used to verify functions of an S/H circuit
known as beat frequency test, as well as an application of S/H circuit, a dual-slope integrating
analog-to-digital (A/D) converter. The first section...
The nursery industry plays a critical role in Oregon's economy. An increase in wood-boring insect, or borer, activity has impacted the industry. The goal of this research is to determine key borer species in the nursery industry, flight times so targeted spray schedules can be established, and assess grower knowledge...
This study was conducted to support a research project sponsored by the National Science Foundation (NSF). The purpose of the NSF research project was to determine how to design kaizen events that result in both short term and long term performance improvements. One of the tools developed to evaluate the...
For the past twenty-seven years, Human Immunodeficiency Virus (HIV)/Acquired Immunodeficiency Syndrome (AIDS) has become a worldwide pandemic. Due to the properties of HIV, such as its fast replication rate and error-prone reverse transcriptase, researchers have been unsuccessful in finding a cure or vaccine. Researchers have, however, developed a treatment regimen...
Eukaryotic cells have developed elaborate biochemical processes to counteract oxidative stress, electrophiles, or carcinogens due to environmental insults. One of these important cellular defense mechanisms is mediated by the transcription factor Nrf2 that have been shown to have decrease activity with age. While the process of which Nrf2 is involved...
We present a model for running that combines active control with passive dynamics,
in an attempt to approach the economy and robustness of animal running. Our
work is inspired by examples of guinea fowl encountering an unexpected drop in
ground surface, with little a ect on their running gait. Previous...
Social networking is the concept that personal connections can form a large web of people and institutions that are essential in an individual’s realization of a goal. Social networking plays an important role in almost every business venture. This has proved to be especially true in the story of Aegir...
Age-related decline in the capacity of endogenous antioxidant systems
complicates pharmaceutical use by the elderly by potentially increasing the toxicity of
some compounds. Of particular interest is chemical detoxification via glutathione (GSH)
and attendant GSH-requiring detoxification enzymes, e.g. GSH peroxidases (GPX) and
GSH S-transferase (GST). These enzymes have been shown...
Mitochondria provide energy for biological cells to function, but this process is also a source of oxygen radicals that are capable of damaging nearby proteins. Mitochondrial protein damage can eventually lead to cell death, especially in the case of heart cells, where mitochondria are present in the highest concentrations. As...
The health care system of post-Apartheid South Africa suffers from an epidemic of
HIV/AIDS and TB with a number of mitigating factors that have caused these diseases to spread.
The purpose of this paper is to explore the causes of the epidemics and to provide a macro and
micro perspective...
A collection of short stories in the style of flash fiction. The themes of the stories include relationships, legality, and friendship. The stories are connect by themes, cross self-referencing, repetition, fragmentation, and characters. The main unifying feature is the characterization of the narrator through his response and commentary. The styles...
This study compares the accounting standards of three different entities, the United Kingdom Generally Accepted Accounting Principles, the domestic accounting standards of France, and the International Financial Reporting Standards (IFRS). The analysis consists of a comparison between two companies, British Airways and Air France – KLM, for FY 2005, specifically...
The purpose of this study was to research and analyze the influencing factors that have led occupational therapy further away from mental health practice. The following research questions were used as a basis to analyze the shift of the OT profession away from mental health:
1. To what extent are...
Non-insulin dependent diabetes mellitus (NIDDM), commonly known as type 2 or
delayed onset diabetes, is a recognized growing global epidemic, which is connected to cultural and behavioral factors, such as diet, exercise, obesity, and genetics. In a recent survey of both men and women in Mexico City, the prevalence of...
Northwest cherry cultivars including Prunus avium 'Bing', Prunus avium 'Rainier', Prunus avium 'Royal Anne' and Prunus cerasus 'Montmorency' were separated into epidermal tissue, flesh and pit and cryogenically milled with liquid nitrogen. These samples as well as whole samples from each variety were extracted with acetone followed by a chloroform...
Antibiotic resistance is an increasing problem in many species of bacteria today, with pathogens an important focus. Fecal contamination of shellfish is already a concern due to potential pathogens. This report examines the possibility of resistance gene transfer between microbes, due to fecal bacteria, within the oyster. In this study,...
Two different types of Phosphorodiamidate Morpholino Oligomers (PMOs) were used to
inhibit growth in pure cultures of Salmonella enterica serovar typhimurium and in mouse
macrophages infected with S. typhimurium. Both PMOs were 11 bases long and
complementary to bases 6-16 of acyl carrier protein mRNA. A membrane-penetrating
peptide, (RXR)4XB, was...
The Gothic cathedrals of France arose in a particular social and political environment, and the material culture, the structures themselves and their contents, bear witness to those realities even today. In addition, the cathedrals themselves were catalysts for cultural change. They encouraged urban growth in a country that had previously...
Through examination of empirical evidence on individuals with Asperger’s Syndrome and related Pervasive Developmental Disorders, the author attempts to provide an overview of the social deficiencies associated with these disorders. Points of primary concern are the social deficiencies in developing competence in experience-sharing and demonstrating empathy, especially in how they...
In the fall of 2005, I studied abroad in Athens, Greece for one term. This is retelling of experiences that I had, written in the style of my memories. While I was in Greece, I kept an electronic diary, a picture diary, and a scrapbook to keep my memories vivid...
Aural Experiences in Ecuador – An Intercultural Dialogue Through Sound takes the listener on a unique auditory journey through Ecuador, exploring its diverse sound environment while examining how one’s cultural perspective influences how those sounds are perceived. The process of listening occurs as a mutual dialogue between the listener and...
Creating intelligent robotics is at the cutting edge of technology. Unmanned aerial vehicles (UAV) are of particular interest for surveillance applications. UAVs have the potential to provide quick and cheap aerial data that would be difficult to obtain by conventional means. UAVs also have the ability to navigate without being...
Volcanism is an agent of major disturbance in many parts of the world. While the effects of volcanic disturbance are fairly well-known among some groups of species, few studies have been performed in bird communities. Likewise, few studies have attempted to compare how communities in temperate and tropical biomes respond...
During summer and fall 2007, I traveled across Europe and studied in Spain. My experiences abroad shaped my reading of certain literary texts as I gained insight into the cultures and settings in which they were produced. In my thesis, I recount some of these experiences and show how my...
In this experiment, 16 three to eight-year-old girls from the Corvallis area came to
our lab with one of their parents. After having the child play with either a Barbie Doll or
a control toy for five minutes, the experimenter orally administered a questionnaire
designed to assess activation of gender...
Collaboration is crucial when advancing in scientific research. One person cannot
study all aspects of a system. That is why it is important for the scientific community to
communicate with each other and stay updated on research being conducted in other labs
around the world. In my research, I was...
The high cost of manually producing background characters creates a demand for a
way to automatically generate plausible behaviors. These background extras need to
behave in a manner that is believable such that they do not distract the focus of the
audience from the primary action occurring in the scene....
Although the question of free will has persisted throughout the history of philosophy as an important metaphysical consideration, rarely does the inquiry include empirical evidence from other disciplines concerned with human behavior. In this interdisciplinary paper, I combine the wisdom of psychologists, metaphysicians, and philosophers of science to comment on...
In this thesis I examine the biocultural affects of nutrition and pregnancy on dental health throughout Ecuador. Factors such as diet, fertility rates, cultural practices and barriers to health care are investigated through a review of the existing literature. Three main regions of Ecuador were selected for examination -- the...
Biodiesel is a renewable, non-toxic, and biodegradable diesel fuel made from agricultural feedstocks. With a vibrant agricultural industry, Oregon is positioned to play an important role in the future of this energy source. Limiting factors to widespread biodiesel production include low value of biodiesel feedstock crops, lack of infrastructure, lagging...
The debate over GM crops is one of the most controversial issues of recent decades. The debate has many dimensions, including environmental impacts, benefits and risks to human health, intellectual property rights, adequacy of biosafety regulations, and fundamental ethical acceptability. The potential benefits of GM crops are numerous, including improved...
Previous studies have revealed distinctive ecotypic differences between garter snakes living in the meadow and lakeshore environments around Eagle Lake in California. Snakes from these contrasting environments have significantly different growth rates, litter sizes, adult body size, annual survival, and coloration. To try and explain these differences, bird predation was...
The following paper is an objective view on the viability of growing the truffle Tuber melanosporum in the Willamette Valley. Included in this study are the history of the truffle, biological cycle, habitat description, method of cultivation and an enterprise budget for commercial production in the Willamette Valley. The truffle,...
In the days following Oct. 5, 2007, the staff of The Daily Barometer - the student newspaper at Oregon State University - was left scrambling for understanding. The paper published a image of a man wearing black face paint for an event called "Blackout Reser." That black face paint looked...
Gene regulatory networks control the state of a cell. Models of such networks have been produced for sea urchin development and suggest that cell type may be defined by distinct network kernels. Such kernels are composed of a set of sequence specific DNA-binding transcription factors (SSTFs) that maintain each other’s...
Clostridium perfringens type A isolates produce the spore-specific enterotoxin, CPE, upon sporulation in the gastrointestinal tract of humans and animals. Spo0A is a response regulator representing the major transcription factor for sporulation initiation in C. perfringens. In Bacillus subtilis, a multicomponent phosphorelay involving five histidine kinases (KinA-KinE), the intermediate response...
Thin films of the p-type semiconductor, barium copper sulfide fluoride (BaCuSF) were deposited using pulsed laser deposition. Similar p-type conductivity in Cu2O is caused by copper vacancies. Addition of copper dopant is proposed as a method for filling the copper vacancies in BaCuSF. The films are characterized to determine quality...
COUP-TF interacting protein 1 (CTIP1) is a novel C2H2 zinc finger protein that mediates transcriptional repression of ARP1, a member of the COUP-TF subfamily of orphan nuclear receptors [1]. Here we show that CTIP1 interacts with heterochromatin-associated protein 1 (HP1) in vitro and in cells. This
interaction suggests the existence...
Soil organic matter (SOM) is the result of the balance between decomposition and incorporation of detritus from both above and below ground sources into the soil. It composes only a fraction of the soil by mass but it is one of the most critical components. The Detritus Input and Removal...
Approximately five to eight percent of domestic rams demonstrate a sexual attraction
towards other rams, directing no sexual behaviors towards estrous ewes. It has been
observed that these male-oriented rams (MORs) have a greater abundance of prolactin
mRNA than female-oriented rams in the medial preoptic area of the anterior
hypothalamus...
Oregon has a growing artisan cheese industry and is developing a reputation as one of the country’s leading regions for many varieties of cheeses. This thesis is an exploration of four of Oregon’s premier artisan creameries. The primary research for this project included visiting the farms and cheesemakers, tasting the...
The purpose of this project was to isolate gabosines and other compounds through chemical screening of secondary metabolites of Streptomyces cellulosae subsp. griseorubiginoses strain S1096. Two different media were used to cultivate S. cellulosae. The first contained soybean and mannitol. The other contained oatmeal and trace element solution. After cultivation...
The prevalence of childhood obesity and overweight has grown significantly in France in the past twenty years. Obesity is associated with many diseases such as metabolic syndrome, diabetes mellitus, cardiovascular disease, hypertension, cancer, and depression. These diseases once confined to adults are increasingly being observed in children. Thus there are...
Chlamydiae are obligate intracellular bacterial pathogens with a unique biphasic life cycle that consists of an infectious but non-dividing form, called elementary bodies (EB), and a noninfectious but metabolically active form, called reticulate bodies (RB). Chlamydia has an unusual process of cell division of which still remains uncharacterized subject matter;...
Aesthetics should be emphasized as much as possible in a design project without
exceeding scope, budget, or schedule to satisfy the stakeholders involved. There
is a rising trend of increased emphasis on aesthetics. This trend of using various
techniques to help structures blend in or contribute to the surrounding
environment...
The Missoula Floods occurred approximately fifteen thousand to thirteen thousand years ago during the last ice age. The floods occurred when waters held back by a finger of the Purcell Ice Lobe gave way allowing water which covered present day Missoula, Montana to inundate areas of Idaho, Washington, and Oregon....
America’s rural Hispanic population is growing at an unprecedented rate. Many of the Hispanic people that are settling in rural communities are immigrants or first generation Americans. If changes to current healthcare systems are required to accommodate the health needs of this growing, low-income rural population they have not been...
Saturated hydraulid conductivity (Ks) is a central soil physical property in determining water movement and contaminant transport through soils; hence modeling this system requires an accurate determination of K. Decimeter-scale KS measurements employing cores or infiltrometers are used frequently, but field-scale KS values are required to encompass the full range...
Raspberry bushy dwarf virus (RBDV) infects red raspberry and black raspberry worldwide. Infection causes reduced vigor and drupelet abortion leading to crumbly fruit and reduced yields. While this crumbly fruit can still be used in juice, jam, and preserves, it cannot be used for the more valuable fresh and individually...
Llama reproductive physiology is unique when compared with other livestock species. Llamas carry 95-98% of all pregnancies in the left uterine horn. It is believed that there is a physiological difference between the uterine horns that contributes to this phenomenon. This study examined the uterine environment for protease and protease...
Consider a simple Markov process on [0,T]. The occupation times were extensively studied in the case of T increasing to infinity. Here we develop a method of computing the distribution for occupation times when T is small via integral equations and integral transforms.
The West Fork Smith River, a 69 km2 watershed in the Coast Range of Oregon, is prone to short periods of very high water temperature in mid-summer due to a combination of human and natural influences. In the summers of 2003 and 2004 more than 400 juvenile coho salmon regularly...
The intention of this honors thesis was to define the boundaries of the basins responsible for feeding sedimentary materials to the core sites taken for the 2007 OSU Sumatra Cruise. These boundaries were defined with the specific use in mind of tracking potential sources of material that would likely be...
Ammonia oxidizing bacteria, including Nitrosomonas europaea, are inhibited by aromatic hydrocarbons which can be found in wastewater treatment plants. In recent studies, changes have been observed in N. europaea cell size upon exposure to benzene, but not toluene. Additionally, NE 1545, a gene proposed to be involved in fatty acid...
A financial processor is the most important component of a credit union‘s IT infrastructure. A database storing member demographic information, account balances, and transaction history, it performs financial calculations, such as interest, dividends, and maturities. It also provides a user interface, allowing tellers and financial service representatives to manage accounts...
Regression testing is a common and necessary task carried out by software practitioners to validate the quality of evolving software systems. Unfortunately, regression testing is often an expensive, time-consuming process, particularly when applied to large software systems. Consequently, practitioners may wish to prioritize the test cases in their regression test...
Adolescents are faced with many life changing decisions as they prepare for adulthood. The choice to engage in sexual activity is among the most difficult of these decisions. Risks, such as unplanned pregnancy, sexually transmitted infections (STIs), and other physical complications associated with early onset sexual activity are a harsh...
The doctor-patient relationship is one of the most unique and privileged relations
a person can have with another human being, and having access to a well-developed and
effective association is important for the experienced and objective quality of health care.
Yet, over the past few decades a number of cultural...
The doctor-patient relationship is one of the most unique and privileged relations a person can have with another human being, and having access to a well-developed and effective association is important for the experienced and objective quality of health care. Yet, over the past few decades a number of cultural...
A survey of a non-random sample of adults was conducted in Angers, France to
investigate possible cultural changes in dietary behaviors that may contribute to
increasing rates of obesity. Participants described contemporary habits regarding eating
habits and activity level, as well as attitudes and opinions about obesity. The results
largely...
Massively multiplayer role-playing games (MMORPG) are becoming a popular leisure activity world-wide. MMORPG players have created a new kind of market, one for virtual possessions. Some players will buy and sell virtual goods for real-world money. Many game developers oppose this real-market trade because it threatens the control of their...
It is necessary to encode data when transmitting over a noisy channel in order for
errors to be detected and corrected. List decoding algorithms provide all code words
within a specified distance of a received word in order to be sufficiently robust for
cases when two or more code words...
One method of fabricating intermetallic nickel-aluminum MECS devices involves diffusion bonding together pre-patterned elemental foils of nickel and aluminum. This process shows good potential for the mass-production of NiAl devices, but several quality issues remain. Of large concern is the deformation of internal features during the bonding process. This research...
The bovine blastocyst is composed of a one-celled layer of trophectoderm
surrounding a fluid filled sac called the blastocoel and a ball of cells called the inner cell
mass (ICM). On Day 8 (Day 0=fertilization) in bovine embryos, endodermal cells leave
the ICM, migrate over the extracellular matrix (ECM) on...
Although males have historically been the focus of the juvenile justice system, females now represent a quarter of juvenile arrests. Since the second wave of feminism in the 1970’s, critics of androcentric policies and programming for delinquents has shifted public attention to the history, experiences, and treatment of girls in...
Objective: To explore the controversial issue of the safety and use of mercury in
amalgam dental fillings. Methods: Using a variety of scientifically oriented studies,
overall trends and conclusions were analyzed. Relevant articles include Children’s
exposure to Amalgam, fetal exposure, environmental mercury, occupational exposure,
and mercury and Multiple Sclerosis. Additional...
An Automated Star Tracking System was designed and built for an undergraduate senior design project. The system was designed as a portable and easy to use means of tracking celestial objects, and is usable for a variety of both personal and professional purposes. The project was built around exploring the...
Design and preliminarily characterization of two thermally-actuated pumps is presented
in this thesis. The unique feature of both pumps is the presence of periodic asymmetrical
structures on the channel walls. Two heat transfer effects are used with surface
asymmetry to generate forces that drive the fluid in a preferential direction...
Designing for construction safety is a collaborative process that combines the field experience of builders with the design skills of architects to improve construction safety. Research studies have shown that the design of a project is a factor in approximately fifty percent of jobsite deaths. To reduce this problem it...
The integration of digital and analog systems on single CMOS integrated circuits will continue to be a major area of research as the consumer market demands low power mobile devices in mass quantity. In prototypical analog integrated systems, calibration is often necessary to achieve the desired performance.
In this thesis,...
The push towards higher performing and more sensitive mixed signal circuitry has required the parallel development of increasingly more complex and sensitive test and calibration harnesses. Current off-chip methods of test and calibration may require higher pin counts or induce unwanted parasitic interference.
In this thesis, the design of a...
Presented in this report is an investigation of the design, construction, and operation of scaled-up cloth electrode assembly (CEA) air-cathode microbial fuel cells (MFCs). 40 mL MFCs were designed and constructed using either single or double CEAs with carbon cloth electrodes. The MFCs were evaluated using acetate media, municipal wastewater,...
We are developing a flavin-containing (Fmo) knock-out mouse for Fmo2 that will be utilized to elucidate the role of active human FMO isoform 2 (FMO2.1) in xenobiotic metabolism and toxicity. Since FMO2 is primarily expressed in lung this will provide information on how 27% of African-Americans and 5% of Hispanics...